Lineage for d1piv.1 (1piv 4:,2:)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075417Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2075626Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2075627Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 protein domains)
    the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
    there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
  6. 2075683Protein Poliovirus coat proteins [49666] (3 species)
  7. 2075723Species Poliovirus type 3, strain Sabin [TaxId:12086] [49669] (7 PDB entries)
  8. 2075742Domain d1piv.1: 1piv 4:,2: [83101]
    complexed with myr, w71

Details for d1piv.1

PDB Entry: 1piv (more details), 2.9 Å

PDB Description: binding of the antiviral drug win51711 to the sabin strain of type 3 poliovirus: structural comparison with drug binding in rhinovirus 14
PDB Compounds: (2:) poliovirus type 3 (subunit vp2), (4:) poliovirus type 3 (subunit vp4)

SCOPe Domain Sequences for d1piv.1:

Sequence, based on SEQRES records: (download)

>g1piv.1 b.121.4.1 (4:,2:) Poliovirus coat proteins {Poliovirus type 3, strain Sabin [TaxId: 12086]}

Sequence, based on observed residues (ATOM records): (download)

>g1piv.1 b.121.4.1 (4:,2:) Poliovirus coat proteins {Poliovirus type 3, strain Sabin [TaxId: 12086]}

SCOPe Domain Coordinates for d1piv.1:

Click to download the PDB-style file with coordinates for d1piv.1.
(The format of our PDB-style files is described here.)

Timeline for d1piv.1: