Lineage for d1it8b4 (1it8 B:361-505)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2935697Fold d.17: Cystatin-like [54402] (7 superfamilies)
    Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet
  4. 2937437Superfamily d.17.6: Pre-PUA domain [88802] (5 families) (S)
    this domain is found in association with the PUA domain in the C-terminal region of Archaeosine tRNA-guanine transglycosylase and related stand-alone proteins
  5. 2937438Family d.17.6.1: Archaeosine tRNA-guanine transglycosylase, C2 domain [88803] (1 protein)
  6. 2937439Protein Archaeosine tRNA-guanine transglycosylase, C2 domain [88804] (1 species)
    the second of the 3 additional C-terminal domains to the TGT-like domain, also includes "linker" C1 domain
  7. 2937440Species Pyrococcus horikoshii [TaxId:53953] [88805] (4 PDB entries)
  8. 2937446Domain d1it8b4: 1it8 B:361-505 [83085]
    Other proteins in same PDB: d1it8a1, d1it8a3, d1it8b1, d1it8b3
    protein/RNA complex; complexed with mg, pq0, zn

Details for d1it8b4

PDB Entry: 1it8 (more details), 2.5 Å

PDB Description: crystal structure of archaeosine trna-guanine transglycosylase from pyrococcus horikoshii complexed with archaeosine precursor, preq0
PDB Compounds: (B:) archaeosine tRNA-guanine transglycosylase

SCOPe Domain Sequences for d1it8b4:

Sequence; same for both SEQRES and ATOM records: (download)

>d1it8b4 d.17.6.1 (B:361-505) Archaeosine tRNA-guanine transglycosylase, C2 domain {Pyrococcus horikoshii [TaxId: 53953]}

SCOPe Domain Coordinates for d1it8b4:

Click to download the PDB-style file with coordinates for d1it8b4.
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Timeline for d1it8b4: