Lineage for d1it8a4 (1it8 A:361-505)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2161468Fold d.17: Cystatin-like [54402] (7 superfamilies)
    Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet
  4. 2162891Superfamily d.17.6: Pre-PUA domain [88802] (5 families) (S)
    this domain is found in association with the PUA domain in the C-terminal region of Archaeosine tRNA-guanine transglycosylase and related stand-alone proteins
  5. 2162892Family d.17.6.1: Archaeosine tRNA-guanine transglycosylase, C2 domain [88803] (1 protein)
  6. 2162893Protein Archaeosine tRNA-guanine transglycosylase, C2 domain [88804] (1 species)
    the second of the 3 additional C-terminal domains to the TGT-like domain, also includes "linker" C1 domain
  7. 2162894Species Pyrococcus horikoshii [TaxId:53953] [88805] (4 PDB entries)
  8. 2162899Domain d1it8a4: 1it8 A:361-505 [83083]
    Other proteins in same PDB: d1it8a1, d1it8a3, d1it8b1, d1it8b3
    protein/RNA complex; complexed with mg, pq0, zn

Details for d1it8a4

PDB Entry: 1it8 (more details), 2.5 Å

PDB Description: Crystal structure of archaeosine tRNA-guanine transglycosylase from Pyrococcus horikoshii complexed with archaeosine precursor, preQ0
PDB Compounds: (A:) archaeosine tRNA-guanine transglycosylase

SCOPe Domain Sequences for d1it8a4:

Sequence; same for both SEQRES and ATOM records: (download)

>d1it8a4 d.17.6.1 (A:361-505) Archaeosine tRNA-guanine transglycosylase, C2 domain {Pyrococcus horikoshii [TaxId: 53953]}

SCOPe Domain Coordinates for d1it8a4:

Click to download the PDB-style file with coordinates for d1it8a4.
(The format of our PDB-style files is described here.)

Timeline for d1it8a4: