Class b: All beta proteins [48724] (126 folds) |
Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies) sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies |
Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (7 families) |
Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (9 proteins) the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2 there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus) |
Protein Rhinovirus coat proteins [49670] (5 species) |
Species Human rhinovirus B 14 (HRV-14) [TaxId:12131] [49671] (28 PDB entries) |
Domain d1hri.1: 1hri 4:,2: [83062] |
PDB Entry: 1hri (more details), 3 Å
SCOP Domain Sequences for d1hri.1:
Sequence; same for both SEQRES and ATOM records: (download)
>g1hri.1 b.121.4.1 (4:,2:) Rhinovirus coat proteins {Human rhinovirus B 14 (HRV-14)} inyykdaastssagqslsmdpskftepvkdlmlkgapalnXgysdrvqqitlgnstittq eaanavvcyaewpeylpdvdasdvnktskpdtsvcrfytldsktwttgskgwcwklpdal kdmgvfgqnmffhslgrsgytvhvqcnatkfhsgcllvvvipehqlasheggnvsvkytf thpgergidlssanevggpvkdvlynmngtllgnllifphqfinlrtnntativipyins vpidsmtrhnnvslmvipiapltvptgatpslpitvtiapmctefsgirsksivpq
Timeline for d1hri.1:
View in 3D Domains from other chains: (mouse over for more information) d1hri1_, d1hri1_, d1hri3_, d1hri3_ |