Lineage for d1bmv21 (1bmv 2:3001-3182)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2409884Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2410108Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2410482Family b.121.4.2: Comoviridae-like VP [88636] (3 protein domains)
    duplication: mature coat protein consists of three similar domains that can be in a single chain or in two separate chains
  6. 2410483Protein Comovirus coat proteins (VP37 and VP23) [49627] (2 species)
    chain 1 is one-domain VP23; chain 2 is two-domain VP37
  7. 2410484Species BPMV (Bean pod mottle virus) [TaxId:12260] [49628] (3 PDB entries)
  8. 2410492Domain d1bmv21: 1bmv 2:3001-3182 [83042]
    protein/RNA complex

Details for d1bmv21

PDB Entry: 1bmv (more details), 3 Å

PDB Description: protein-rna interactions in an icosahedral virus at 3.0 angstroms resolution
PDB Compounds: (2:) protein (icosahedral virus - b and c domain)

SCOPe Domain Sequences for d1bmv21:

Sequence; same for both SEQRES and ATOM records: (download)

>d1bmv21 b.121.4.2 (2:3001-3182) Comovirus coat proteins (VP37 and VP23) {BPMV (Bean pod mottle virus) [TaxId: 12260]}

SCOPe Domain Coordinates for d1bmv21:

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(The format of our PDB-style files is described here.)

Timeline for d1bmv21:

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