SCOPe 2.08: Protein: 5'-Methylthioadenosine/S-Adenosylhomocysteine nucleosidase

Lineage for Protein: 5'-Methylthioadenosine/S-Adenosylhomocysteine nucleosidase

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops

Superfamily c.56.2: Purine and uridine phosphorylases [53167] (2 families)

complex architecture; contains mixed beta-sheet of 8 strands, order 23415867, strands 3, 6 & 7 are antiparallel to the rest; and barrel, closed; n=5, S=8

Family c.56.2.1: Purine and uridine phosphorylases [53168] (7 proteins)
Protein 5'-Methylthioadenosine/S-Adenosylhomocysteine nucleosidase [82448] (3 species)

Species:

Escherichia coli [TaxId:562] [82449] (8 PDB entries)
1. Domains for 1jys:
  1. Domain d1jysa_: 1jys A: [77216]
    complexed with ade
  2. Domain d1jysb_: 1jys B: [77217]
    complexed with ade
2. Domains for 1nc1:
  1. Domain d1nc1a1: 1nc1 A:1-232 [91779]
    Other proteins in same PDB: d1nc1a2
    complexed with mth
  2. Domain d1nc1b_: 1nc1 B: [91780]
    Other proteins in same PDB: d1nc1a2
    complexed with mth
3. Domains for 1nc3:
  1. Domain d1nc3a1: 1nc3 A:1-232 [85546]
    Other proteins in same PDB: d1nc3a2
    complexed with fmc
  2. Domain d1nc3b_: 1nc3 B: [85547]
    Other proteins in same PDB: d1nc3a2
    complexed with fmc
4. Domains for 1y6q:
  1. Domain d1y6qa2: 1y6q A:1-232 [122670]
    Other proteins in same PDB: d1y6qa3
    automated match to d1nc3a_
    complexed with cl, tdi
  2. Domain d1y6qb_: 1y6q B: [122671]
    Other proteins in same PDB: d1y6qa3
    automated match to d1nc3a_
    complexed with cl, tdi
5. Domains for 1y6r:
  1. Domain d1y6ra2: 1y6r A:1-232 [122672]
    Other proteins in same PDB: d1y6ra3
    automated match to d1nc3a_
    complexed with mtm
  2. Domain d1y6rb_: 1y6r B: [122673]
    Other proteins in same PDB: d1y6ra3
    automated match to d1nc3a_
    complexed with mtm
6. Domains for 1z5n:
  1. Domain d1z5na1: 1z5n A:1-232 [162386]
    Other proteins in same PDB: d1z5na2
    automated match to d1nc3a_
    complexed with ade, sr1; mutant
  2. Domain d1z5nb_: 1z5n B: [162387]
    Other proteins in same PDB: d1z5na2
    automated match to d1nc3a_
    complexed with ade, sr1; mutant
7. Domains for 1z5o:
  1. Domain d1z5oa1: 1z5o A:1-232 [162388]
    Other proteins in same PDB: d1z5oa2
    automated match to d1nc3a_
    complexed with mta; mutant
  2. Domain d1z5ob_: 1z5o B: [162389]
    Other proteins in same PDB: d1z5oa2
    automated match to d1nc3a_
    complexed with mta; mutant
8. Domain for 1z5p:
  - Domain d1z5pa_: 1z5p A: [124487]
    automated match to d1nc3a_
    complexed with gol, ipa, pe5
Neisseria meningitidis [TaxId:491] [188964] (1 PDB entry)
- Domains for 3eei:
  1. Domain d3eeia_: 3eei A: [174891]
    automated match to d1nc1b_
    complexed with mtm
  2. Domain d3eeib_: 3eei B: [174892]
    automated match to d1nc1b_
    complexed with mtm
Staphylococcus aureus [TaxId:1280] [188463] (1 PDB entry)
- Domain for 3bl6:
  - Domain d3bl6a1: 3bl6 A:1-228 [172697]
    Other proteins in same PDB: d3bl6a2
    automated match to d1nc1a_
    complexed with fmc

More info for Protein 5'-Methylthioadenosine/S-Adenosylhomocysteine nucleosidase from c.56.2.1: Purine and uridine phosphorylases

Timeline for Protein 5'-Methylthioadenosine/S-Adenosylhomocysteine nucleosidase from c.56.2.1: Purine and uridine phosphorylases:

Protein 5'-Methylthioadenosine/S-Adenosylhomocysteine nucleosidase from c.56.2.1: Purine and uridine phosphorylases first appeared in SCOP 1.63
Protein 5'-Methylthioadenosine/S-Adenosylhomocysteine nucleosidase from c.56.2.1: Purine and uridine phosphorylases appears in SCOPe 2.07