SCOPe 2.06: Protein: Rab5a

Lineage for Protein: Rab5a

Root: SCOPe 2.06
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families)
division into families based on beta-sheet topologies
Family c.37.1.8: G proteins [52592] (79 proteins)
core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest
Protein Rab5a [82399] (1 species)

Species:

Human (Homo sapiens) [TaxId:9606] [82400] (12 PDB entries)
Uniprot P20339 18-182
1. Domain for 1n6h:
  - Domain d1n6ha_: 1n6h A: [80197]
    complexed with bme, gnp, mg
2. Domain for 1n6i:
  - Domain d1n6ia_: 1n6i A: [80198]
    complexed with bme, gdp, mg; mutant
3. Domain for 1n6k:
  - Domain d1n6ka_: 1n6k A: [80199]
    complexed with af3, bme, gdp, mg; mutant
4. Domain for 1n6l:
  - Domain d1n6la_: 1n6l A: [80200]
    complexed with bme, gtp, mg; mutant
5. Domain for 1n6n:
  - Domain d1n6na_: 1n6n A: [80201]
    complexed with bme, gnp, mg; mutant
6. Domain for 1n6o:
  - Domain d1n6oa_: 1n6o A: [80202]
    complexed with bme, gnp, mg; mutant
7. Domain for 1n6p:
  - Domain d1n6pa_: 1n6p A: [80203]
    complexed with gnp, mg; mutant
8. Domain for 1n6r:
  - Domain d1n6ra_: 1n6r A: [80211]
    complexed with bme, gnp, mg; mutant
9. Domain for 1r2q:
  - Domain d1r2qa_: 1r2q A: [96874]
    complexed with gnp, gol, mg
10. Domains for 1tu3:
  1. Domain d1tu3a_: 1tu3 A: [112639]
    Other proteins in same PDB: d1tu3f_, d1tu3g_, d1tu3h_, d1tu3i_, d1tu3j_
    complexed with gnp, mg
  2. Domain d1tu3b_: 1tu3 B: [112640]
    Other proteins in same PDB: d1tu3f_, d1tu3g_, d1tu3h_, d1tu3i_, d1tu3j_
    complexed with gnp, mg
  3. Domain d1tu3c_: 1tu3 C: [112641]
    Other proteins in same PDB: d1tu3f_, d1tu3g_, d1tu3h_, d1tu3i_, d1tu3j_
    complexed with gnp, mg
  4. Domain d1tu3d_: 1tu3 D: [112642]
    Other proteins in same PDB: d1tu3f_, d1tu3g_, d1tu3h_, d1tu3i_, d1tu3j_
    complexed with gnp, mg
  5. Domain d1tu3e_: 1tu3 E: [112643]
    Other proteins in same PDB: d1tu3f_, d1tu3g_, d1tu3h_, d1tu3i_, d1tu3j_
    complexed with gnp, mg
11. Domains for 1tu4:
  1. Domain d1tu4a_: 1tu4 A: [112649]
    complexed with co, gdp, so4
  2. Domain d1tu4b_: 1tu4 B: [112650]
    complexed with co, gdp, so4
  3. Domain d1tu4c_: 1tu4 C: [112651]
    complexed with co, gdp, so4
  4. Domain d1tu4d_: 1tu4 D: [112652]
    complexed with co, gdp, so4
12. Domains for 3mjh:
  1. Domain d3mjha_: 3mjh A: [181298]
    automated match to d1tu4a_
    complexed with gtp, mg, zn
  2. Domain d3mjhc_: 3mjh C: [181299]
    automated match to d1tu4a_
    complexed with gtp, mg, zn

More info for Protein Rab5a from c.37.1.8: G proteins

Timeline for Protein Rab5a from c.37.1.8: G proteins:

Protein Rab5a from c.37.1.8: G proteins first appeared in SCOP 1.63
Protein Rab5a from c.37.1.8: G proteins appears in SCOPe 2.05
Protein Rab5a from c.37.1.8: G proteins appears in SCOPe 2.07
Protein Rab5a from c.37.1.8: G proteins appears in the current release, SCOPe 2.08