Lineage for Protein: Protooncoprotein Her2 extracellular domain

  1. Root: SCOP 1.71
  2. 570216Class c: Alpha and beta proteins (a/b) [51349] (134 folds)
  3. 577591Fold c.10: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046] (3 superfamilies)
    2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies
  4. 577632Superfamily c.10.2: L domain-like [52058] (8 families) (S)
    less regular structure consisting of variable repeats
  5. 577679Family c.10.2.5: L domain [52071] (4 proteins)
  6. 577692Protein Protooncoprotein Her2 extracellular domain [82328] (2 species)

Species:

  1. 577693Human (Homo sapiens) [TaxId:9606] [82329] (2 PDB entries)
    1. Domains for 1n8z:
      1. 577694Domain d1n8zc1: 1n8z C:1-165 [80322]
        Other proteins in same PDB: d1n8za1, d1n8za2, d1n8zb1, d1n8zb2, d1n8zc3, d1n8zc4
      2. 577695Domain d1n8zc2: 1n8z C:323-488 [80323]
        Other proteins in same PDB: d1n8za1, d1n8za2, d1n8zb1, d1n8zb2, d1n8zc3, d1n8zc4
        complexed with nag, so4
    2. Domains for 1s78:
      1. 577696Domain d1s78a1: 1s78 A:1-165 [98616]
        Other proteins in same PDB: d1s78a3, d1s78a4, d1s78b3, d1s78b4, d1s78c1, d1s78c2, d1s78d1, d1s78d2, d1s78e1, d1s78e2, d1s78f1, d1s78f2
      2. 577697Domain d1s78a2: 1s78 A:323-488 [98617]
        Other proteins in same PDB: d1s78a3, d1s78a4, d1s78b3, d1s78b4, d1s78c1, d1s78c2, d1s78d1, d1s78d2, d1s78e1, d1s78e2, d1s78f1, d1s78f2
      3. 577698Domain d1s78b1: 1s78 B:1-165 [98620]
        Other proteins in same PDB: d1s78a3, d1s78a4, d1s78b3, d1s78b4, d1s78c1, d1s78c2, d1s78d1, d1s78d2, d1s78e1, d1s78e2, d1s78f1, d1s78f2
      4. 577699Domain d1s78b2: 1s78 B:323-488 [98621]
        Other proteins in same PDB: d1s78a3, d1s78a4, d1s78b3, d1s78b4, d1s78c1, d1s78c2, d1s78d1, d1s78d2, d1s78e1, d1s78e2, d1s78f1, d1s78f2
        complexed with man, nag
  2. 577700Rat (Rattus norvegicus) [TaxId:10116] [82330] (1 PDB entry)

More info for Protein Protooncoprotein Her2 extracellular domain from c.10.2.5: L domain

Timeline for Protein Protooncoprotein Her2 extracellular domain from c.10.2.5: L domain: