SCOPe 2.07: Protein: Methylene-tetrahydromethanopterin dehydrogenase

Lineage for Protein: Methylene-tetrahydromethanopterin dehydrogenase

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
The nucleotide-binding modes of this and the next two folds/superfamilies are similar

Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

Family c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain [51883] (12 proteins)
extra N-terminal helix displaces the C-terminal helix (following strand 6) from its usual position creating a family nicotineamide-binding site

Protein Methylene-tetrahydromethanopterin dehydrogenase [82303] (1 species)

Species:

Methylobacterium extorquens [TaxId:408] [82304] (2 PDB entries)
1. Domains for 1lu9:
  1. Domain d1lu9a1: 1lu9 A:98-288 [78210]
    Other proteins in same PDB: d1lu9a2, d1lu9b2, d1lu9c2
  2. Domain d1lu9b1: 1lu9 B:98-288 [78212]
    Other proteins in same PDB: d1lu9a2, d1lu9b2, d1lu9c2
  3. Domain d1lu9c1: 1lu9 C:98-288 [78214]
    Other proteins in same PDB: d1lu9a2, d1lu9b2, d1lu9c2
2. Domains for 1lua:
  1. Domain d1luaa1: 1lua A:98-288 [78216]
    Other proteins in same PDB: d1luaa2, d1luab2, d1luac2
    complexed with nap
  2. Domain d1luab1: 1lua B:98-288 [78218]
    Other proteins in same PDB: d1luaa2, d1luab2, d1luac2
    complexed with nap
  3. Domain d1luac1: 1lua C:98-288 [78220]
    Other proteins in same PDB: d1luaa2, d1luab2, d1luac2
    complexed with nap

More info for Protein Methylene-tetrahydromethanopterin dehydrogenase from c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain

Timeline for Protein Methylene-tetrahydromethanopterin dehydrogenase from c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain:

Protein Methylene-tetrahydromethanopterin dehydrogenase from c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain first appeared in SCOP 1.63
Protein Methylene-tetrahydromethanopterin dehydrogenase from c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain appears in SCOPe 2.06
Protein Methylene-tetrahydromethanopterin dehydrogenase from c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain appears in the current release, SCOPe 2.08