Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies) contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 the first seven superfamilies have similar phosphate-binding sites |
Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families) the beta-sheet barrel is similarly distorted and capped by a C-terminal helix has transition metal ions bound inside the barrel |
Family c.1.9.11: D-aminoacylase, catalytic domain [82264] (1 protein) |
Protein N-acyl-D-aminoacid amidohydrolase, catalytic domain [82265] (1 species) contains small a/b subdomain inserted after strand 7; unusual for the superfamily metal coordination by Cys |
Species Alcaligenes faecalis [TaxId:511] [82266] (8 PDB entries) |
Domain d1m7ja3: 1m7j A:62-419 [78734] Other proteins in same PDB: d1m7ja1, d1m7ja2 complexed with act, zn |
Domain d1rjpa3: 1rjp A:62-419 [97574] Other proteins in same PDB: d1rjpa1, d1rjpa2 complexed with act, cu, zn |
Domain d1rjqa3: 1rjq A:62-419 [97577] Other proteins in same PDB: d1rjqa1, d1rjqa2 complexed with act, zn; mutant |
Domain d1rjra3: 1rjr A:62-419 [97580] Other proteins in same PDB: d1rjra1, d1rjra2 complexed with act, zn; mutant |
Domain d1rk5a3: 1rk5 A:62-419 [97598] Other proteins in same PDB: d1rk5a1, d1rk5a2 complexed with act, cu, zn; mutant |
Domain d1rk6a3: 1rk6 A:62-419 [97601] Other proteins in same PDB: d1rk6a1, d1rk6a2 complexed with act, cd, zn |
Domain d1v4ya3: 1v4y A:62-419 [100317] Other proteins in same PDB: d1v4ya1, d1v4ya2 complexed with act, zn |
Domain d1v51a3: 1v51 A:62-419 [100320] Other proteins in same PDB: d1v51a1, d1v51a2 complexed with act, zn |
Timeline for Species Alcaligenes faecalis [TaxId:511] from c.1.9.11 N-acyl-D-aminoacid amidohydrolase, catalytic domain: