Lineage for Protein: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families) (S)
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
  5. Family c.1.9.10: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain [82261] (1 protein)
    automatically mapped to Pfam PF01979
  6. Protein N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain [82262] (3 species)

Species:

  1. Bacillus subtilis [TaxId:1423] [102086] (1 PDB entry)
  2. Escherichia coli [TaxId:562] [141808] (4 PDB entries)
    Uniprot P0AF18 54-350
    1. Domains for 1ymy:
      1. Domain d1ymya2: 1ymy A:54-350 [123709]
        Other proteins in same PDB: d1ymya1, d1ymyb1
      2. Domain d1ymyb2: 1ymy B:54-350 [123711]
        Other proteins in same PDB: d1ymya1, d1ymyb1
        automated match to d1ymya2
    2. Domains for 1yrr:
      1. Domain d1yrra2: 1yrr A:54-350 [123936]
        Other proteins in same PDB: d1yrra1, d1yrrb1
        automated match to d1ymya2
        complexed with gol, po4
      2. Domain d1yrrb2: 1yrr B:54-350 [123938]
        Other proteins in same PDB: d1yrra1, d1yrrb1
        automated match to d1ymya2
        complexed with gol, po4
    3. Domains for 2p50:
      1. Domain d2p50a2: 2p50 A:54-350 [149224]
        Other proteins in same PDB: d2p50a1, d2p50b1, d2p50c1, d2p50d1
        automated match to d1ymya2
        complexed with zn
      2. Domain d2p50b2: 2p50 B:54-350 [149226]
        Other proteins in same PDB: d2p50a1, d2p50b1, d2p50c1, d2p50d1
        automated match to d1ymya2
        complexed with zn
      3. Domain d2p50c2: 2p50 C:54-350 [149228]
        Other proteins in same PDB: d2p50a1, d2p50b1, d2p50c1, d2p50d1
        automated match to d1ymya2
        complexed with zn
      4. Domain d2p50d2: 2p50 D:54-350 [149230]
        Other proteins in same PDB: d2p50a1, d2p50b1, d2p50c1, d2p50d1
        automated match to d1ymya2
        complexed with zn
    4. Domains for 2p53:
      1. Domain d2p53a2: 2p53 A:54-350 [149232]
        Other proteins in same PDB: d2p53a1, d2p53b1
        automatically matched to d1ymya2
        complexed with nng, zn; mutant
      2. Domain d2p53b2: 2p53 B:54-350 [149234]
        Other proteins in same PDB: d2p53a1, d2p53b1
        automatically matched to d1ymya2
        complexed with nng, zn; mutant
  3. Thermotoga maritima [TaxId:2336] [82263] (1 PDB entry)
    TM0814

More info for Protein N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain from c.1.9.10: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain

Timeline for Protein N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain from c.1.9.10: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain: