SCOPe 2.08: Protein: RuBisCo LSMT catalytic domain

Lineage for Protein: RuBisCo LSMT catalytic domain

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)
Fold b.85: beta-clip [51268] (7 superfamilies)
double-stranded ribbon sharply bent in two places; the ribbon ends form incomplete barrel; jelly-roll

Superfamily b.85.7: SET domain [82199] (4 families)

(S)

duplication: the core is composed of two structural repeats similar to (circularly permuted) repeats of AFPIII
also contains a substrate-binding alpha+beta subdomain inserted in the core
Pfam PF00856

Family b.85.7.3: RuBisCo LSMT catalytic domain [82210] (1 protein)
Protein RuBisCo LSMT catalytic domain [82211] (1 species)

Species:

Pea (Pisum sativum) [TaxId:3888] [82212] (7 PDB entries)
1. Domains for 1mlv:
  1. Domain d1mlva2: 1mlv A:50-310 [79284]
    Other proteins in same PDB: d1mlva1, d1mlva3, d1mlvb1, d1mlvb3, d1mlvc1, d1mlvc3
    complexed with epe, sah
  2. Domain d1mlvb2: 1mlv B:49-310 [79286]
    Other proteins in same PDB: d1mlva1, d1mlva3, d1mlvb1, d1mlvb3, d1mlvc1, d1mlvc3
    complexed with epe, sah
  3. Domain d1mlvc2: 1mlv C:50-310 [79288]
    Other proteins in same PDB: d1mlva1, d1mlva3, d1mlvb1, d1mlvb3, d1mlvc1, d1mlvc3
    complexed with epe, sah
2. Domains for 1ozv:
  1. Domain d1ozva2: 1ozv A:50-310 [87633]
    Other proteins in same PDB: d1ozva1, d1ozva3, d1ozvb1, d1ozvb3, d1ozvc1, d1ozvc3
    complexed with lys, sah
  2. Domain d1ozvb2: 1ozv B:48-310 [87635]
    Other proteins in same PDB: d1ozva1, d1ozva3, d1ozvb1, d1ozvb3, d1ozvc1, d1ozvc3
    complexed with lys, sah
  3. Domain d1ozvc2: 1ozv C:49-310 [87637]
    Other proteins in same PDB: d1ozva1, d1ozva3, d1ozvb1, d1ozvb3, d1ozvc1, d1ozvc3
    complexed with lys, sah
3. Domains for 1p0y:
  1. Domain d1p0ya2: 1p0y A:49-310 [87655]
    Other proteins in same PDB: d1p0ya1, d1p0ya3, d1p0yb1, d1p0yb3, d1p0yc1, d1p0yc3
    complexed with mlz, sah
  2. Domain d1p0yb2: 1p0y B:48-310 [87657]
    Other proteins in same PDB: d1p0ya1, d1p0ya3, d1p0yb1, d1p0yb3, d1p0yc1, d1p0yc3
    complexed with mlz, sah
  3. Domain d1p0yc2: 1p0y C:49-310 [87659]
    Other proteins in same PDB: d1p0ya1, d1p0ya3, d1p0yb1, d1p0yb3, d1p0yc1, d1p0yc3
    complexed with mlz, sah
4. Domains for 2h21:
  1. Domain d2h21a2: 2h21 A:50-310 [135977]
    Other proteins in same PDB: d2h21a1, d2h21a3, d2h21b1, d2h21b3, d2h21c1, d2h21c3
    automated match to d1p0ya2
    complexed with sam
  2. Domain d2h21b2: 2h21 B:49-310 [135979]
    Other proteins in same PDB: d2h21a1, d2h21a3, d2h21b1, d2h21b3, d2h21c1, d2h21c3
    automated match to d1p0ya2
    complexed with sam
  3. Domain d2h21c2: 2h21 C:50-310 [135981]
    Other proteins in same PDB: d2h21a1, d2h21a3, d2h21b1, d2h21b3, d2h21c1, d2h21c3
    automated match to d1p0ya2
    complexed with sam
5. Domains for 2h23:
  1. Domain d2h23a2: 2h23 A:50-310 [135983]
    Other proteins in same PDB: d2h23a1, d2h23a3, d2h23b1, d2h23b3, d2h23c1, d2h23c3
    automated match to d1p0ya2
    complexed with m3l, sah
  2. Domain d2h23b2: 2h23 B:49-310 [135985]
    Other proteins in same PDB: d2h23a1, d2h23a3, d2h23b1, d2h23b3, d2h23c1, d2h23c3
    automated match to d1p0ya2
    complexed with m3l, sah
  3. Domain d2h23c2: 2h23 C:50-310 [135987]
    Other proteins in same PDB: d2h23a1, d2h23a3, d2h23b1, d2h23b3, d2h23c1, d2h23c3
    automated match to d1p0ya2
    complexed with m3l, sah
6. Domains for 2h2e:
  1. Domain d2h2ea2: 2h2e A:50-310 [135999]
    Other proteins in same PDB: d2h2ea1, d2h2ea3, d2h2eb1, d2h2eb3, d2h2ec1, d2h2ec3
    automated match to d1p0ya2
    complexed with lys, sa8
  2. Domain d2h2eb2: 2h2e B:49-310 [136001]
    Other proteins in same PDB: d2h2ea1, d2h2ea3, d2h2eb1, d2h2eb3, d2h2ec1, d2h2ec3
    automated match to d1p0ya2
    complexed with lys, sa8
  3. Domain d2h2ec2: 2h2e C:50-310 [136003]
    Other proteins in same PDB: d2h2ea1, d2h2ea3, d2h2eb1, d2h2eb3, d2h2ec1, d2h2ec3
    automated match to d1p0ya2
    complexed with lys, sa8
7. Domains for 2h2j:
  1. Domain d2h2ja2: 2h2j A:50-310 [136009]
    Other proteins in same PDB: d2h2ja1, d2h2ja3, d2h2jb1, d2h2jb3, d2h2jc1, d2h2jc3
    automated match to d1p0ya2
    complexed with mlz, sfg
  2. Domain d2h2jb2: 2h2j B:49-310 [136011]
    Other proteins in same PDB: d2h2ja1, d2h2ja3, d2h2jb1, d2h2jb3, d2h2jc1, d2h2jc3
    automated match to d1p0ya2
    complexed with mlz, sfg
  3. Domain d2h2jc2: 2h2j C:50-310 [136013]
    Other proteins in same PDB: d2h2ja1, d2h2ja3, d2h2jb1, d2h2jb3, d2h2jc1, d2h2jc3
    automated match to d1p0ya2
    complexed with mlz, sfg

More info for Protein RuBisCo LSMT catalytic domain from b.85.7.3: RuBisCo LSMT catalytic domain

Timeline for Protein RuBisCo LSMT catalytic domain from b.85.7.3: RuBisCo LSMT catalytic domain:

Protein RuBisCo LSMT catalytic domain from b.85.7.3: RuBisCo LSMT catalytic domain first appeared in SCOP 1.63
Protein RuBisCo LSMT catalytic domain from b.85.7.3: RuBisCo LSMT catalytic domain appears in SCOPe 2.07