Lineage for Protein: B1 domain of neuropilin-1

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2039145Fold b.18: Galactose-binding domain-like [49784] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll
  4. 2039146Superfamily b.18.1: Galactose-binding domain-like [49785] (35 families) (S)
  5. 2039169Family b.18.1.2: Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) [49791] (4 protein domains)
    automatically mapped to Pfam PF00754
  6. 2039170Protein B1 domain of neuropilin-1 [82016] (2 species)

Species:

  1. 2039171Human (Homo sapiens) [TaxId:9606] [82017] (9 PDB entries)
    1. Domain for 1kex:
    2. Domain for 4rn5:
    3. Domain for 5c7g:
    4. Domains for 5ijr:
      1. 2289032Domain d5ijrb1: 5ijr B:273-427 [332333]
        Other proteins in same PDB: d5ijrb2
        automated match to d1kexa_
        complexed with dms, hrg
      2. 2289033Domain d5ijra_: 5ijr A: [332334]
        Other proteins in same PDB: d5ijrb2
        automated match to d1kexa_
        complexed with dms, hrg
    5. Domains for 5iyy:
      1. 2289235Domain d5iyya1: 5iyy A:273-427 [332536]
        Other proteins in same PDB: d5iyya2, d5iyyb2
        automated match to d1kexa_
        complexed with r40
      2. 2289239Domain d5iyyb1: 5iyy B:273-427 [332540]
        Other proteins in same PDB: d5iyya2, d5iyyb2
        automated match to d1kexa_
        complexed with r40
    6. Domains for 5j1x:
      1. 2289243Domain d5j1xb_: 5j1x B: [332544]
        Other proteins in same PDB: d5j1xc2
        automated match to d1kexa_
        complexed with ar5, dms
      2. 2289293Domain d5j1xd_: 5j1x D: [332594]
        Other proteins in same PDB: d5j1xc2
        automated match to d1kexa_
        complexed with ar5, dms
      3. 2289302Domain d5j1xc1: 5j1x C:273-427 [332603]
        Other proteins in same PDB: d5j1xc2
        automated match to d1kexa_
        complexed with ar5, dms
      4. 2289325Domain d5j1xa_: 5j1x A: [332626]
        Other proteins in same PDB: d5j1xc2
        automated match to d1kexa_
        complexed with ar5, dms
    7. Domains for 5jgi:
      1. 2290902Domain d5jgia1: 5jgi A:273-427 [334203]
        Other proteins in same PDB: d5jgia2
        automated match to d1kexa_
        complexed with aag
      2. 2290985Domain d5jgib_: 5jgi B: [334286]
        Other proteins in same PDB: d5jgia2
        automated match to d1kexa_
        complexed with aag
    8. Domains for 5jgq:
      1. 2290819Domain d5jgqb_: 5jgq B: [334120]
        Other proteins in same PDB: d5jgqa2
        automated match to d1kexa_
        complexed with 6jy, dms
      2. 2290834Domain d5jgqa1: 5jgq A:273-427 [334135]
        Other proteins in same PDB: d5jgqa2
        automated match to d1kexa_
        complexed with 6jy, dms
    9. Domains for 5jhk:
      1. 2291247Domain d5jhka_: 5jhk A: [334548]
        Other proteins in same PDB: d5jhkb2
        automated match to d1kexa_
        complexed with 6k8
      2. 2291272Domain d5jhkb1: 5jhk B:273-427 [334573]
        Other proteins in same PDB: d5jhkb2
        automated match to d1kexa_
        complexed with 6k8
  2. 2039174Norway rat (Rattus norvegicus) [TaxId:10116] [256384] (1 PDB entry)

More info for Protein B1 domain of neuropilin-1 from b.18.1.2: Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain)

Timeline for Protein B1 domain of neuropilin-1 from b.18.1.2: Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain):

  • Protein B1 domain of neuropilin-1 from b.18.1.2: Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) first appeared in SCOP 1.63
  • Protein B1 domain of neuropilin-1 from b.18.1.2: Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) appears in SCOPe 2.05