SCOP 1.71: Protein: DNA repair protein MutM (Fpg)

Lineage for Protein: DNA repair protein MutM (Fpg)

Root: SCOP 1.71
Class a: All alpha proteins [46456] (226 folds)
Fold a.156: S13-like H2TH domain [81297] (1 superfamily)
core: 3-4 helices
Superfamily a.156.1: S13-like H2TH domain [46946] (3 families)
contains a helix-two turns-helix (H2TH) motif
Family a.156.1.2: Middle domain of MutM-like DNA repair proteins [81626] (3 proteins)
contains 4 helices in the core
Protein DNA repair protein MutM (Fpg) [81620] (4 species)

Species:

Bacillus stearothermophilus [TaxId:1422] [81611] (7 PDB entries)
1. Domain for 1l1t:
  - Domain d1l1ta1: 1l1t A:135-220 [75908]
    Other proteins in same PDB: d1l1ta2, d1l1ta3
    bound to abasic-site containing DNA
    complexed with hpd, zn
2. Domain for 1l1z:
  - Domain d1l1za1: 1l1z A:135-222 [75911]
    Other proteins in same PDB: d1l1za2, d1l1za3
    covalent-DNA intermediate
    complexed with ped, zn
3. Domain for 1l2b:
  - Domain d1l2ba1: 1l2b A:135-223 [75914]
    Other proteins in same PDB: d1l2ba2, d1l2ba3
    DNA end-product structure
    complexed with ad2, zn
4. Domain for 1l2c:
  - Domain d1l2ca1: 1l2c A:135-220 [75917]
    Other proteins in same PDB: d1l2ca2, d1l2ca3
    DNA estranged thymine mismatch recognition complex
    complexed with hpd, zn
5. Domain for 1l2d:
  - Domain d1l2da1: 1l2d A:135-220 [75920]
    Other proteins in same PDB: d1l2da2, d1l2da3
    DNA estranged guanine mismatch recognition complex
    complexed with hpd, zn
6. Domain for 1r2y:
  - Domain d1r2ya1: 1r2y A:135-228 [96889]
    Other proteins in same PDB: d1r2ya2, d1r2ya3
    bound to 8-Oxoguanine (OxoG) containing DNA
    complexed with 8og, zn; mutant
7. Domain for 1r2z:
  - Domain d1r2za1: 1r2z A:135-228 [96892]
    Other proteins in same PDB: d1r2za2, d1r2za3
    bound to 5,6-Dihydrouracil (DhU) containing DNA
    complexed with dhu, zn; mutant
Escherichia coli [TaxId:562] [81614] (1 PDB entry)
- Domains for 1k82:
  1. Domain d1k82a1: 1k82 A:129-216 [75866]
    Other proteins in same PDB: d1k82a2, d1k82a3, d1k82b2, d1k82b3, d1k82c2, d1k82c3, d1k82d2, d1k82d3
  2. Domain d1k82b1: 1k82 B:129-216 [75869]
    Other proteins in same PDB: d1k82a2, d1k82a3, d1k82b2, d1k82b3, d1k82c2, d1k82c3, d1k82d2, d1k82d3
  3. Domain d1k82c1: 1k82 C:129-216 [75872]
    Other proteins in same PDB: d1k82a2, d1k82a3, d1k82b2, d1k82b3, d1k82c2, d1k82c3, d1k82d2, d1k82d3
  4. Domain d1k82d1: 1k82 D:129-216 [75875]
    Other proteins in same PDB: d1k82a2, d1k82a3, d1k82b2, d1k82b3, d1k82c2, d1k82c3, d1k82d2, d1k82d3
    covalently trapped with DNA
    complexed with ped, zn
Lactococcus lactis [TaxId:1358] [81615] (6 PDB entries)
1. Domains for 1kfv:
  1. Domain d1kfva1: 1kfv A:132-219 [75886]
    Other proteins in same PDB: d1kfva2, d1kfva3, d1kfvb2, d1kfvb3
  2. Domain d1kfvb1: 1kfv B:132-217 [75889]
    Other proteins in same PDB: d1kfva2, d1kfva3, d1kfvb2, d1kfvb3
    complexed with cry, mse, pdi, zn; mutant
2. Domain for 1nnj:
  - Domain d1nnja1: 1nnj A:132-219 [80669]
    Other proteins in same PDB: d1nnja2, d1nnja3
    complexed with cry, pdi, zn; mutant
3. Domain for 1pji:
  - Domain d1pjia1: 1pji A:132-218 [104161]
    Other proteins in same PDB: d1pjia2, d1pjia3
    complexed with cry, pdi, zn
4. Domain for 1pjj:
  - Domain d1pjja1: 1pjj A:132-223 [104164]
    Other proteins in same PDB: d1pjja2, d1pjja3
    complexed with 3dr, gol, zn; mutant
5. Domain for 1pm5:
  - Domain d1pm5a1: 1pm5 A:132-222 [104190]
    Other proteins in same PDB: d1pm5a2, d1pm5a3
    complexed with 3dr, gol, zn
6. Domain for 1tdz:
  - Domain d1tdza1: 1tdz A:132-219 [106787]
    Other proteins in same PDB: d1tdza2, d1tdza3
    complexed with fox, gol, zn
Thermus thermophilus [TaxId:274] [81608] (1 PDB entry)
- Domains for 1ee8:
  1. Domain d1ee8a1: 1ee8 A:122-210 [75823]
    Other proteins in same PDB: d1ee8a2, d1ee8a3, d1ee8b2, d1ee8b3
  2. Domain d1ee8b1: 1ee8 B:122-210 [75826]
    Other proteins in same PDB: d1ee8a2, d1ee8a3, d1ee8b2, d1ee8b3
    complexed with zn

More info for Protein DNA repair protein MutM (Fpg) from a.156.1.2: Middle domain of MutM-like DNA repair proteins

Timeline for Protein DNA repair protein MutM (Fpg) from a.156.1.2: Middle domain of MutM-like DNA repair proteins:

Protein DNA repair protein MutM (Fpg) from a.156.1.2: Middle domain of MutM-like DNA repair proteins first appeared in SCOP 1.63
Protein DNA repair protein MutM (Fpg) from a.156.1.2: Middle domain of MutM-like DNA repair proteins appears in SCOP 1.69
Protein DNA repair protein MutM (Fpg) from a.156.1.2: Middle domain of MutM-like DNA repair proteins appears in SCOP 1.73
Protein DNA repair protein MutM (Fpg) from a.156.1.2: Middle domain of MutM-like DNA repair proteins appears in the current release, SCOPe 2.08