Class d: Alpha and beta proteins (a+b) [53931] (376 folds) |
Fold d.218: Nucleotidyltransferase [81302] (1 superfamily) core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123 |
Superfamily d.218.1: Nucleotidyltransferase [81301] (14 families) |
Family d.218.1.2: DNA polymerase beta-like [81300] (4 proteins) insert X in the core is an alpha-beta(2) unit; mixed 5-stranded sheet, order: 12543; contains extra C-terminal alpha+beta subdomain |
Protein DNA polymerase beta, catalytic (31 kD) fragment [81578] (2 species) |
Human (Homo sapiens) [TaxId:9606] [81574] (107 PDB entries) Uniprot P06746 |
Domain d1bpxa4: 1bpx A:149-335 [75818] Other proteins in same PDB: d1bpxa1, d1bpxa3 protein/DNA complex; complexed with na |
Domain d1bpya4: 1bpy A:149-335 [75820] Other proteins in same PDB: d1bpya1, d1bpya3 protein/DNA complex; complexed with dct, doc, mg, na |
Domain d1bpza4: 1bpz A:149-335 [75822] Other proteins in same PDB: d1bpza1, d1bpza3 protein/DNA complex; complexed with na |
Domain d1mq2a3: 1mq2 A:149-335 [79396] Other proteins in same PDB: d1mq2a1, d1mq2a2 complexed with 2da, 8og, a, na |
Domain d1mq3a3: 1mq3 A:149-335 [79399] Other proteins in same PDB: d1mq3a1, d1mq3a2 complexed with 8og, dcp, doc, mg, na |
Domain d1tv9a3: 1tv9 A:149-335 [112677] Other proteins in same PDB: d1tv9a1, d1tv9a2 complexed with mg, na, po4 |
Domain d1tvaa3: 1tva A:149-335 [112680] Other proteins in same PDB: d1tvaa1, d1tvaa2 complexed with mg, na, po4 |
Domain d1zjma3: 1zjm A:149-335 [125155] Other proteins in same PDB: d1zjma1, d1zjma2 automatically matched to d1bpxa4 complexed with na |
Domain d1zjna3: 1zjn A:149-334 [125158] Other proteins in same PDB: d1zjna1, d1zjna2 automatically matched to d1bpxa4 complexed with dgt, mg, na |
Domain d1zqaa4: 1zqa A:149-335 [75936] Other proteins in same PDB: d1zqaa1, d1zqaa3 protein/DNA complex; complexed with k |
Domain d1zqba4: 1zqb A:149-335 [75938] Other proteins in same PDB: d1zqba1, d1zqba3 protein/DNA complex; complexed with ba |
Domain d1zqca4: 1zqc A:149-335 [75940] Other proteins in same PDB: d1zqca1, d1zqca3 protein/DNA complex; complexed with ca |
Domain d1zqda4: 1zqd A:149-335 [75942] Other proteins in same PDB: d1zqda1, d1zqda3 protein/DNA complex; complexed with ca |
Domain d1zqea4: 1zqe A:149-335 [75944] Other proteins in same PDB: d1zqea1, d1zqea3 protein/DNA complex; complexed with cr |
Domain d1zqfa4: 1zqf A:149-335 [75946] Other proteins in same PDB: d1zqfa1, d1zqfa3 protein/DNA complex; complexed with cs |
Domain d1zqga4: 1zqg A:149-335 [75948] Other proteins in same PDB: d1zqga1, d1zqga3 protein/DNA complex; complexed with na |
Domain d1zqha4: 1zqh A:149-335 [75950] Other proteins in same PDB: d1zqha1, d1zqha3 protein/DNA complex; complexed with na |
Domain d1zqia4: 1zqi A:149-335 [75952] Other proteins in same PDB: d1zqia1, d1zqia3 protein/DNA complex; complexed with k |
Domain d1zqja4: 1zqj A:149-335 [75954] Other proteins in same PDB: d1zqja1, d1zqja3 protein/DNA complex; complexed with ca |
Domain d1zqka4: 1zqk A:149-335 [75956] Other proteins in same PDB: d1zqka1, d1zqka3 protein/DNA complex; complexed with k |
Domain d1zqla4: 1zql A:149-335 [75958] Other proteins in same PDB: d1zqla1, d1zqla3 protein/DNA complex; complexed with mn |
Domain d1zqma4: 1zqm A:149-335 [75960] Other proteins in same PDB: d1zqma1, d1zqma3 protein/DNA complex; complexed with mn |
Domain d1zqna4: 1zqn A:149-335 [75962] Other proteins in same PDB: d1zqna1, d1zqna3 protein/DNA complex; complexed with ba |
Domain d1zqoa4: 1zqo A:149-335 [75964] Other proteins in same PDB: d1zqoa1, d1zqoa3 protein/DNA complex; complexed with na |
Domain d1zqpa4: 1zqp A:149-335 [75966] Other proteins in same PDB: d1zqpa1, d1zqpa3 protein/DNA complex; complexed with k |
Domain d1zqqa4: 1zqq A:149-335 [75968] Other proteins in same PDB: d1zqqa1, d1zqqa3 protein/DNA complex; complexed with mn, na |
Domain d1zqra4: 1zqr A:149-335 [75970] Other proteins in same PDB: d1zqra1, d1zqra3 protein/DNA complex; complexed with na, ni |
Domain d1zqsa4: 1zqs A:149-335 [75972] Other proteins in same PDB: d1zqsa1, d1zqsa3 protein/DNA complex; complexed with na |
Domain d1zqta4: 1zqt A:149-335 [75974] Other proteins in same PDB: d1zqta1, d1zqta3 protein/DNA complex; complexed with na, zn |
Domain d2fmpa3: 2fmp A:149-335 [133788] Other proteins in same PDB: d2fmpa1, d2fmpa2 automatically matched to d1bpxa4 complexed with dct, doc, mg, na |
Domain d2fmqa3: 2fmq A:149-335 [133791] Other proteins in same PDB: d2fmqa1, d2fmqa2 automatically matched to d1bpxa4 complexed with dup, mg, na |
Domain d2fmsa3: 2fms A:149-335 [133794] Other proteins in same PDB: d2fmsa1, d2fmsa2 automatically matched to d1bpxa4 complexed with cl, dup, mg, na |
Domain d2i9ga3: 2i9g A:149-335 [137128] Other proteins in same PDB: d2i9ga1, d2i9ga2 automatically matched to d1bpxa4 complexed with bpi, cl, doc, na |
Domain d2isoa3: 2iso A:149-335 [137608] Other proteins in same PDB: d2isoa1, d2isoa2 automatically matched to d1bpxa4 complexed with cl, doc, gff, mg, na |
Domain d2ispa3: 2isp A:149-335 [137611] Other proteins in same PDB: d2ispa1, d2ispa2 automatically matched to d1bpxa4 complexed with cl, doc, ggh, mg, na |
Domain d2p66a3: 2p66 A:149-335 [139508] Other proteins in same PDB: d2p66a1, d2p66a2 automatically matched to d1bpxa4 complexed with 3dr, na, po4 |
Domain d2pxia3: 2pxi A:149-335 [149913] Other proteins in same PDB: d2pxia1, d2pxia2 automatically matched to d1bpxa4 complexed with cl, doc, gfh, mg, na |
Domain d3c2ka3: 3c2k A:149-335 [155878] Other proteins in same PDB: d3c2ka1, d3c2ka2 automatically matched to d1bpxa4 complexed with cl, dup, mn, na |
Domain d3c2la3: 3c2l A:149-335 [155881] Other proteins in same PDB: d3c2la1, d3c2la2 automatically matched to d1bpxa4 complexed with f2a, mn, na |
Domain d3c2ma3: 3c2m A:149-335 [155884] Other proteins in same PDB: d3c2ma1, d3c2ma2 automatically matched to d1bpxa4 complexed with edo, f2a, mn, na |
Domain d7icea4: 7ice A:149-335 [76001] Other proteins in same PDB: d7icea1, d7icea3 protein/DNA complex; complexed with na |
Domain d7icfa4: 7icf A:149-335 [76003] Other proteins in same PDB: d7icfa1, d7icfa3 protein/DNA complex; complexed with cd, na |
Domain d7icga4: 7icg A:149-335 [76005] Other proteins in same PDB: d7icga1, d7icga3 protein/DNA complex; complexed with na |
Domain d7icha4: 7ich A:149-335 [76007] Other proteins in same PDB: d7icha1, d7icha3 protein/DNA complex; complexed with na |
Domain d7icia4: 7ici A:149-335 [76009] Other proteins in same PDB: d7icia1, d7icia3 protein/DNA complex; complexed with na |
Domain d7icja4: 7icj A:149-335 [76011] Other proteins in same PDB: d7icja1, d7icja3 protein/DNA complex; complexed with cu, na |
Domain d7icka4: 7ick A:149-335 [76013] Other proteins in same PDB: d7icka1, d7icka3 protein/DNA complex; complexed with na |
Domain d7icla4: 7icl A:149-335 [76015] Other proteins in same PDB: d7icla1, d7icla3 protein/DNA complex; complexed with na |
Domain d7icma4: 7icm A:149-335 [76017] Other proteins in same PDB: d7icma1, d7icma3 protein/DNA complex; complexed with na |
Domain d7icna4: 7icn A:149-335 [76019] Other proteins in same PDB: d7icna1, d7icna3 protein/DNA complex; complexed with na |
Domain d7icoa4: 7ico A:149-335 [76021] Other proteins in same PDB: d7icoa1, d7icoa3 protein/DNA complex; complexed with na, zn |
Domain d7icpa4: 7icp A:149-335 [76023] Other proteins in same PDB: d7icpa1, d7icpa3 protein/DNA complex; complexed with na, zn |
Domain d7icqa4: 7icq A:149-335 [76025] Other proteins in same PDB: d7icqa1, d7icqa3 protein/DNA complex; complexed with na, zn |
Domain d7icra4: 7icr A:149-335 [76027] Other proteins in same PDB: d7icra1, d7icra3 protein/DNA complex; complexed with na, zn |
Domain d7icsa4: 7ics A:149-335 [76029] Other proteins in same PDB: d7icsa1, d7icsa3 protein/DNA complex; complexed with na |
Domain d7icta4: 7ict A:149-335 [76031] Other proteins in same PDB: d7icta1, d7icta3 protein/DNA complex; complexed with na, zn |
Domain d7icua4: 7icu A:149-335 [76033] Other proteins in same PDB: d7icua1, d7icua3 protein/DNA complex; complexed with cd, na |
Domain d7icva4: 7icv A:149-335 [76035] Other proteins in same PDB: d7icva1, d7icva3 protein/DNA complex; complexed with na |
Domain d8icaa4: 8ica A:149-335 [76037] Other proteins in same PDB: d8icaa1, d8icaa3 protein/DNA complex; complexed with ca, dtp, na |
Domain d8icba4: 8icb A:149-335 [76039] Other proteins in same PDB: d8icba1, d8icba3 protein/DNA complex; complexed with na |
Domain d8icca4: 8icc A:149-335 [76041] Other proteins in same PDB: d8icca1, d8icca3 protein/DNA complex; complexed with na |
Domain d8icea4: 8ice A:149-335 [76043] Other proteins in same PDB: d8icea1, d8icea3 protein/DNA complex; complexed with cd, dtp, na |
Domain d8icfa4: 8icf A:149-335 [76045] Other proteins in same PDB: d8icfa1, d8icfa3 protein/DNA complex; complexed with dtp, na |
Domain d8icga4: 8icg A:149-335 [76047] Other proteins in same PDB: d8icga1, d8icga3 protein/DNA complex; complexed with na |
Domain d8icha4: 8ich A:149-335 [76049] Other proteins in same PDB: d8icha1, d8icha3 protein/DNA complex; complexed with na |
Domain d8icia4: 8ici A:149-335 [76051] Other proteins in same PDB: d8icia1, d8icia3 protein/DNA complex; complexed with mg, na |
Domain d8icja4: 8icj A:149-335 [76053] Other proteins in same PDB: d8icja1, d8icja3 protein/DNA complex; complexed with na, ttp |
Domain d8icka4: 8ick A:149-335 [76055] Other proteins in same PDB: d8icka1, d8icka3 protein/DNA complex; complexed with dtp, mn, na |
Domain d8icla4: 8icl A:149-335 [76057] Other proteins in same PDB: d8icla1, d8icla3 protein/DNA complex; complexed with dtp, na, ni |
Domain d8icma4: 8icm A:149-335 [76059] Other proteins in same PDB: d8icma1, d8icma3 protein/DNA complex; complexed with na, so4 |
Domain d8icna4: 8icn A:149-335 [76061] Other proteins in same PDB: d8icna1, d8icna3 protein/DNA complex; complexed with atp, mn, na |
Domain d8icoa4: 8ico A:149-335 [76063] Other proteins in same PDB: d8icoa1, d8icoa3 protein/DNA complex; complexed with azt, mn, na |
Domain d8icpa4: 8icp A:149-335 [76065] Other proteins in same PDB: d8icpa1, d8icpa3 protein/DNA complex; complexed with dtp, mn, na |
Domain d8icqa4: 8icq A:149-335 [76067] Other proteins in same PDB: d8icqa1, d8icqa3 protein/DNA complex; complexed with na |
Domain d8icra4: 8icr A:149-335 [76069] Other proteins in same PDB: d8icra1, d8icra3 protein/DNA complex; complexed with dtp, mn, na |
Domain d8icsa4: 8ics A:149-335 [76071] Other proteins in same PDB: d8icsa1, d8icsa3 protein/DNA complex; complexed with dcp, mn, na |
Domain d8icta4: 8ict A:149-335 [76073] Other proteins in same PDB: d8icta1, d8icta3 protein/DNA complex; complexed with dcp, mn, na |
Domain d8icua4: 8icu A:149-335 [76075] Other proteins in same PDB: d8icua1, d8icua3 protein/DNA complex; complexed with dad, mn, na |
Domain d8icva4: 8icv A:149-335 [76077] Other proteins in same PDB: d8icva1, d8icva3 protein/DNA complex; complexed with dgt, mn, na |
Domain d8icwa4: 8icw A:149-335 [76079] Other proteins in same PDB: d8icwa1, d8icwa3 protein/DNA complex; complexed with mn, na, ttp |
Domain d8icxa4: 8icx A:149-335 [76081] Other proteins in same PDB: d8icxa1, d8icxa3 protein/DNA complex; complexed with mn, na, ttp |
Domain d8icya4: 8icy A:149-335 [76083] Other proteins in same PDB: d8icya1, d8icya3 protein/DNA complex; complexed with mn, na, ttp |
Domain d8icza4: 8icz A:149-335 [76085] Other proteins in same PDB: d8icza1, d8icza3 protein/DNA complex; complexed with na, so4 |
Domain d9icaa4: 9ica A:149-335 [76088] Other proteins in same PDB: d9icaa1, d9icaa3 protein/DNA complex; complexed with mn, stp |
Domain d9icba4: 9icb A:149-335 [76090] Other proteins in same PDB: d9icba1, d9icba3 protein/DNA complex; complexed with co, dtp, na |
Domain d9icca4: 9icc A:149-335 [76092] Other proteins in same PDB: d9icca1, d9icca3 protein/DNA complex; complexed with cr, dtp, na |
Domain d9icea4: 9ice A:149-335 [76094] Other proteins in same PDB: d9icea1, d9icea3 protein/DNA complex; complexed with na |
Domain d9icfa4: 9icf A:149-335 [76096] Other proteins in same PDB: d9icfa1, d9icfa3 protein/DNA complex; complexed with dtp, na, zn |
Domain d9icga4: 9icg A:149-335 [76098] Other proteins in same PDB: d9icga1, d9icga3 protein/DNA complex; complexed with dcp, na, zn |
Domain d9icha4: 9ich A:149-335 [76100] Other proteins in same PDB: d9icha1, d9icha3 protein/DNA complex; complexed with dgt, na, zn |
Domain d9icia4: 9ici A:149-335 [76102] Other proteins in same PDB: d9icia1, d9icia3 protein/DNA complex; complexed with na, zn |
Domain d9icja4: 9icj A:149-335 [76104] Other proteins in same PDB: d9icja1, d9icja3 protein/DNA complex; complexed with na, so4 |
Domain d9icka4: 9ick A:149-335 [76106] Other proteins in same PDB: d9icka1, d9icka3 protein/DNA complex; complexed with na |
Domain d9icla4: 9icl A:149-335 [76108] Other proteins in same PDB: d9icla1, d9icla3 protein/DNA complex; complexed with mn, na |
Domain d9icma4: 9icm A:149-335 [76110] Other proteins in same PDB: d9icma1, d9icma3 protein/DNA complex; complexed with na |
Domain d9icna4: 9icn A:149-335 [76112] Other proteins in same PDB: d9icna1, d9icna3 protein/DNA complex; complexed with dct, mg, na |
Domain d9icoa4: 9ico A:149-335 [76114] Other proteins in same PDB: d9icoa1, d9icoa3 protein/DNA complex; complexed with na |
Domain d9icpa4: 9icp A:149-335 [76116] Other proteins in same PDB: d9icpa1, d9icpa3 protein/DNA complex; complexed with na |
Domain d9icqa4: 9icq A:149-335 [76118] Other proteins in same PDB: d9icqa1, d9icqa3 protein/DNA complex; complexed with dtp, mn, na |
Domain d9icra4: 9icr A:149-335 [76120] Other proteins in same PDB: d9icra1, d9icra3 protein/DNA complex; complexed with dcp, mn, na |
Domain d9icsa4: 9ics A:149-335 [76122] Other proteins in same PDB: d9icsa1, d9icsa3 protein/DNA complex; complexed with dct, mn, na |
Domain d9icta4: 9ict A:149-335 [76124] Other proteins in same PDB: d9icta1, d9icta3 protein/DNA complex; complexed with dgt, mn, na |
Domain d9icua4: 9icu A:149-335 [76126] Other proteins in same PDB: d9icua1, d9icua3 protein/DNA complex; complexed with mn, na, ttp |
Domain d9icva4: 9icv A:149-335 [76128] Other proteins in same PDB: d9icva1, d9icva3 protein/DNA complex; complexed with dtp, na, zn |
Domain d9icwa4: 9icw A:149-335 [76130] Other proteins in same PDB: d9icwa1, d9icwa3 protein/DNA complex; complexed with na, so4 |
Domain d9icxa4: 9icx A:149-335 [76132] Other proteins in same PDB: d9icxa1, d9icxa3 protein/DNA complex; complexed with na |
Domain d9icya4: 9icy A:149-335 [76134] Other proteins in same PDB: d9icya1, d9icya3 protein/DNA complex; complexed with na, so4 |
Rat (Rattus norvegicus) [TaxId:10116] [81576] (18 PDB entries) |
Domain d1bpba2: 1bpb A:149-335 [75812] Other proteins in same PDB: d1bpba1 |
Domain d1bpda3: 1bpd A:149-335 [75814] Other proteins in same PDB: d1bpda1, d1bpda2 complexed with po4 |
Domain d1bpea3: 1bpe A:149-335 [75816] Other proteins in same PDB: d1bpea1, d1bpea2 complexed with dtp |
Domain d1huoa4: 1huo A:149-334 [75847] Other proteins in same PDB: d1huoa1, d1huoa3, d1huob1, d1huob3 |
Domain d1huob4: 1huo B:149-334 [75849] Other proteins in same PDB: d1huoa1, d1huoa3, d1huob1, d1huob3 complexed with cr, tte |
Domain d1huza4: 1huz A:149-334 [75851] Other proteins in same PDB: d1huza1, d1huza3, d1huzb1, d1huzb3 |
Domain d1huzb4: 1huz B:149-334 [75853] Other proteins in same PDB: d1huza1, d1huza3, d1huzb1, d1huzb3 complexed with cr, mdn |
Domain d1jn3a2: 1jn3 A:149-335 [75865] Other proteins in same PDB: d1jn3a1 mutant |
Domain d1noma2: 1nom A:149-335 [75930] Other proteins in same PDB: d1noma1 complexed with mn |
Domain d1rpla2: 1rpl A:149-335 [75934] Other proteins in same PDB: d1rpla1 |
Domain d1zqua2: 1zqu A:149-335 [75976] Other proteins in same PDB: d1zqua1 |
Domain d1zqva2: 1zqv A:149-335 [75978] Other proteins in same PDB: d1zqva1 complexed with ca |
Domain d1zqwa2: 1zqw A:149-335 [75980] Other proteins in same PDB: d1zqwa1 |
Domain d1zqxa2: 1zqx A:149-335 [75982] Other proteins in same PDB: d1zqxa1 |
Domain d1zqya2: 1zqy A:149-335 [75984] Other proteins in same PDB: d1zqya1 |
Domain d1zqza2: 1zqz A:149-335 [75986] Other proteins in same PDB: d1zqza1 complexed with mn |
Domain d2bpca2: 2bpc A:149-335 [75990] Other proteins in same PDB: d2bpca1 complexed with mn |
Domain d2bpfa4: 2bpf A:149-335 [75992] Other proteins in same PDB: d2bpfa1, d2bpfa3 protein/DNA complex; complexed with dct, mg |
Domain d2bpga4: 2bpg A:149-335 [75994] Other proteins in same PDB: d2bpga1, d2bpga3, d2bpgb1, d2bpgb3 |
Domain d2bpgb4: 2bpg B:149-335 [75996] Other proteins in same PDB: d2bpga1, d2bpga3, d2bpgb1, d2bpgb3 protein/DNA complex; complexed with dct, mg |
Domain d2vana2: 2van A:149-335 [152827] Other proteins in same PDB: d2vana1 automatically matched to d1bpba2 mutant |
Timeline for Protein DNA polymerase beta, catalytic (31 kD) fragment from d.218.1.2: DNA polymerase beta-like: