Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1998615Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 1999483Superfamily a.60.12: PsbU/PolX domain-like [81585] (3 families) (S)
    contains one classic and one pseudo HhH motifs
  5. 1999484Family a.60.12.1: DNA polymerase beta-like, second domain [81584] (3 protein domains)
    topological similarity to the N-terminal domain
    automatically mapped to Pfam PF10391
  6. 1999485Protein DNA polymerase beta [81579] (2 species)
  7. 1999632Species Norway rat (Rattus norvegicus) [TaxId:10116] [81577] (23 PDB entries)

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

  1. Domain(s) for 1bpb:
  2. Domain(s) for 1bpd:
  3. Domain(s) for 1bpe:
  4. Domain(s) for 1huo:
    1. 1999645Domain d1huoa3: 1huo A:92-148 [75846]
      Other proteins in same PDB: d1huoa1, d1huoa4, d1huob1, d1huob4
      protein/DNA complex; complexed with cr, tte
    2. 1999646Domain d1huob3: 1huo B:92-148 [75848]
      Other proteins in same PDB: d1huoa1, d1huoa4, d1huob1, d1huob4
      protein/DNA complex; complexed with cr, tte
  5. Domain(s) for 1huz:
    1. 1999643Domain d1huza3: 1huz A:92-148 [75850]
      Other proteins in same PDB: d1huza1, d1huza4, d1huzb1, d1huzb4
      protein/DNA complex; complexed with cr, mdn
    2. 1999644Domain d1huzb3: 1huz B:92-148 [75852]
      Other proteins in same PDB: d1huza1, d1huza4, d1huzb1, d1huzb4
      protein/DNA complex; complexed with cr, mdn
  6. Domain(s) for 1jn3:
  7. Domain(s) for 1nom:
  8. Domain(s) for 1rpl:
  9. Domain(s) for 1zqu:
  10. Domain(s) for 1zqv:
  11. Domain(s) for 1zqw:
  12. Domain(s) for 1zqx:
  13. Domain(s) for 1zqy:
  14. Domain(s) for 1zqz:
  15. Domain(s) for 2bpc:
  16. Domain(s) for 2bpf:
  17. Domain(s) for 2bpg:
    1. 1999659Domain d2bpga3: 2bpg A:92-148 [75993]
      Other proteins in same PDB: d2bpga1, d2bpga4, d2bpgb1, d2bpgb4
      protein/DNA complex; complexed with dct, mg
    2. 1999660Domain d2bpgb3: 2bpg B:92-148 [75995]
      Other proteins in same PDB: d2bpga1, d2bpga4, d2bpgb1, d2bpgb4
      protein/DNA complex; complexed with dct, mg
  18. Domain(s) for 3k75:
    1. 1999654Domain d3k75d1: 3k75 D:91-148 [232673]
      Other proteins in same PDB: d3k75b_, d3k75c_, d3k75d2, d3k75d3, d3k75e2
      automated match to d2vana1
    2. 1999655Domain d3k75e1: 3k75 E:93-148 [232674]
      Other proteins in same PDB: d3k75b_, d3k75c_, d3k75d2, d3k75d3, d3k75e2
      automated match to d2vana1
  19. Domain(s) for 3uxn:
    1. 1999648Domain d3uxna2: 3uxn A:92-148 [217565]
      Other proteins in same PDB: d3uxna1, d3uxna3, d3uxnb1, d3uxnb3
      automated match to d1huza3
    2. 1999649Domain d3uxnb2: 3uxn B:92-148 [217568]
      Other proteins in same PDB: d3uxna1, d3uxna3, d3uxnb1, d3uxnb3
      automated match to d1huza3
  20. Domain(s) for 3uxo:
    1. 1999635Domain d3uxoa2: 3uxo A:92-148 [250278]
      Other proteins in same PDB: d3uxoa1, d3uxoa3, d3uxob1, d3uxob3
      automated match to d4klia2
    2. 1999636Domain d3uxob2: 3uxo B:92-148 [250281]
      Other proteins in same PDB: d3uxoa1, d3uxoa3, d3uxob1, d3uxob3
      automated match to d4klia2
  21. Domain(s) for 3v7j:
  22. Domain(s) for 3v7k:
  23. Domain(s) for 3v7l:

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from a.60.12.1 DNA polymerase beta

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from a.60.12.1 DNA polymerase beta: