Protein: M (medium) subunit

Structural Classification of Proteins and ASTRAL release 1.75 (June 2009)

Lineage for Protein: M (medium) subunit

Root: SCOP 1.75
Class f: Membrane and cell surface proteins and peptides [56835] (58 folds)
Fold f.26: Bacterial photosystem II reaction centre, L and M subunits [81484] (1 superfamily)
five transmembrane helices forming a sheet-like structure
Superfamily f.26.1: Bacterial photosystem II reaction centre, L and M subunits [81483] (1 family)
Family f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits [81482] (4 protein domains)
L and M are probably related to each other
Protein M (medium) subunit [81481] (3 species)

Species:

Rhodobacter sphaeroides [TaxId:1063] [81479] (65 PDB entries)
Uniprot P02953
1. Domains for 1aig:
  1. Domain d1aigm_: 1aig M: [43483]
    Other proteins in same PDB: d1aigh1, d1aigh2, d1aigl_, d1aign_, d1aigp1, d1aigp2
  2. Domain d1aigo_: 1aig O: [43486]
    Other proteins in same PDB: d1aigh1, d1aigh2, d1aigl_, d1aign_, d1aigp1, d1aigp2
    complexed with bcl, bph, fe2, u10
2. Domains for 1aij:
  1. Domain d1aijm_: 1aij M: [43462]
    Other proteins in same PDB: d1aijh1, d1aijh2, d1aijl_, d1aijr_, d1aijt1, d1aijt2
  2. Domain d1aijs_: 1aij S: [43465]
    Other proteins in same PDB: d1aijh1, d1aijh2, d1aijl_, d1aijr_, d1aijt1, d1aijt2
    complexed with bcl, bph, fe2, lda, u10
3. Domains for 1ds8:
  1. Domain d1ds8m_: 1ds8 M: [43471]
    Other proteins in same PDB: d1ds8h1, d1ds8h2, d1ds8l_, d1ds8r_, d1ds8t1, d1ds8t2
  2. Domain d1ds8s_: 1ds8 S: [43474]
    Other proteins in same PDB: d1ds8h1, d1ds8h2, d1ds8l_, d1ds8r_, d1ds8t1, d1ds8t2
    complexed with bcl, bph, cd, cl, fe2, lda, u10
4. Domains for 1dv3:
  1. Domain d1dv3m_: 1dv3 M: [43477]
    Other proteins in same PDB: d1dv3h1, d1dv3h2, d1dv3l_, d1dv3r_, d1dv3t1, d1dv3t2
  2. Domain d1dv3s_: 1dv3 S: [43480]
    Other proteins in same PDB: d1dv3h1, d1dv3h2, d1dv3l_, d1dv3r_, d1dv3t1, d1dv3t2
    complexed with bcl, bph, cd, cl, fe2, lda, u10
5. Domains for 1dv6:
  1. Domain d1dv6m_: 1dv6 M: [43489]
    Other proteins in same PDB: d1dv6h1, d1dv6h2, d1dv6l_, d1dv6r_, d1dv6t1, d1dv6t2
  2. Domain d1dv6s_: 1dv6 S: [43492]
    Other proteins in same PDB: d1dv6h1, d1dv6h2, d1dv6l_, d1dv6r_, d1dv6t1, d1dv6t2
    complexed with bcl, bph, cl, fe2, lda, u10, zn
6. Domain for 1e14:
  - Domain d1e14m_: 1e14 M: [43498]
    Other proteins in same PDB: d1e14h1, d1e14h2, d1e14l_
    complexed with bcl, bph, cdl, fe, lda, spn, u10; mutant
7. Domain for 1e6d:
  - Domain d1e6dm_: 1e6d M: [43459]
    Other proteins in same PDB: d1e6dh1, d1e6dh2, d1e6dl_
    complexed with bcl, bph, fe, lda, po4, spn, u10; mutant
8. Domain for 1f6n:
  - Domain d1f6nm_: 1f6n M: [59661]
    Other proteins in same PDB: d1f6nh1, d1f6nh2, d1f6nl_
    complexed with bcl, bph, fe, lda, po4, spo, u10; mutant
9. Domain for 1fnp:
  - Domain d1fnpm_: 1fnp M: [59915]
    Other proteins in same PDB: d1fnph1, d1fnph2, d1fnpl_
    complexed with bcl, bph, fe, lda, po4, spo, u10; mutant
10. Domain for 1fnq:
  - Domain d1fnqm_: 1fnq M: [59919]
    Other proteins in same PDB: d1fnqh1, d1fnqh2, d1fnql_
    complexed with bcl, bph, fe, lda, po4, spo, u10; mutant
11. Domain for 1jgw:
  - Domain d1jgwm_: 1jgw M: [63021]
    Other proteins in same PDB: d1jgwh1, d1jgwh2, d1jgwl_
    complexed with bcl, bph, cdl, fe, spo, u10; mutant
12. Domain for 1jgx:
  - Domain d1jgxm_: 1jgx M: [63025]
    Other proteins in same PDB: d1jgxh1, d1jgxh2, d1jgxl_
    complexed with bcl, bph, fe, spo, u10; mutant
13. Domain for 1jgy:
  - Domain d1jgym_: 1jgy M: [63029]
    Other proteins in same PDB: d1jgyh1, d1jgyh2, d1jgyl_
    complexed with bcl, bph, cdl, fe, spo, u10; mutant
14. Domain for 1jgz:
  - Domain d1jgzm_: 1jgz M: [63033]
    Other proteins in same PDB: d1jgzh1, d1jgzh2, d1jgzl_
    complexed with bcl, bph, cdl, fe, spo, u10; mutant
15. Domain for 1jh0:
  - Domain d1jh0m_: 1jh0 M: [63037]
    Other proteins in same PDB: d1jh0h1, d1jh0h2, d1jh0l_
    complexed with bcl, bph, fe, spo, u10; mutant
16. Domain for 1k6l:
  - Domain d1k6lm_: 1k6l M: [72087]
    Other proteins in same PDB: d1k6lh1, d1k6lh2, d1k6ll_
    complexed with bcl, bph, cdl, fe, lda, spn, u10
17. Domain for 1k6n:
  - Domain d1k6nm_: 1k6n M: [72091]
    Other proteins in same PDB: d1k6nh1, d1k6nh2, d1k6nl_
    complexed with bcl, bph, cdl, fe, lda, spn, u10; mutant
18. Domain for 1kby:
  - Domain d1kbym_: 1kby M: [77330]
    Other proteins in same PDB: d1kbyh1, d1kbyh2, d1kbyl_
    complexed with bcl, bph, cdl, cl, fe, spo, u10; mutant
19. Domain for 1l9b:
  - Domain d1l9bm_: 1l9b M: [73715]
    Other proteins in same PDB: d1l9bc_, d1l9bh1, d1l9bh2, d1l9bl_
    complexed with bcl, bph, cl, fe2, hem, hto, lda, na, u10
20. Domains for 1l9j:
  1. Domain d1l9jm_: 1l9j M: [73727]
    Other proteins in same PDB: d1l9jc_, d1l9jd_, d1l9jh1, d1l9jh2, d1l9jl_, d1l9jr_, d1l9jt1, d1l9jt2
  2. Domain d1l9js_: 1l9j S: [73729]
    Other proteins in same PDB: d1l9jc_, d1l9jd_, d1l9jh1, d1l9jh2, d1l9jl_, d1l9jr_, d1l9jt1, d1l9jt2
    complexed with bcl, bph, cl, fe2, hem, lda, u10
21. Domain for 1m3x:
  - Domain d1m3xm_: 1m3x M: [74436]
    Other proteins in same PDB: d1m3xh1, d1m3xh2, d1m3xl_
    complexed with bcl, bph, cdl, cl, fe, ggd, pc2, spo, u10
22. Domain for 1mps:
  - Domain d1mpsm_: 1mps M: [43468]
    Other proteins in same PDB: d1mpsh1, d1mpsh2, d1mpsl_
    complexed with bcl, bph, fe2, lda, po4, spn, u10; mutant
23. Domain for 1ogv:
  - Domain d1ogvm_: 1ogv M: [92951]
    Other proteins in same PDB: d1ogvh1, d1ogvh2, d1ogvl_
    complexed with bcl, bph, cdl, cl, fe2, u10
24. Domain for 1pcr:
  - Domain d1pcrm_: 1pcr M: [43495]
    Other proteins in same PDB: d1pcrh1, d1pcrh2, d1pcrl_
    complexed with bcl, bph, fe, lda, po4, spo, u10
25. Domain for 1pss:
  - Domain d1pssm_: 1pss M: [43501]
    Other proteins in same PDB: d1pssh1, d1pssh2, d1pssl_
    complexed with bcl, bph, crt, fe, u10
26. Domain for 1pst:
  - Domain d1pstm_: 1pst M: [43504]
    Other proteins in same PDB: d1psth1, d1psth2, d1pstl_
    complexed with bcl, bph, crt, fe, u10; mutant
27. Domain for 1qov:
  - Domain d1qovm_: 1qov M: [43456]
    Other proteins in same PDB: d1qovh1, d1qovh2, d1qovl_
28. Domain for 1rg5:
  - Domain d1rg5m_: 1rg5 M: [97426]
    Other proteins in same PDB: d1rg5h1, d1rg5h2, d1rg5l_
    complexed with bcl, bph, cdl, fe, hto, lda, u10
29. Domain for 1rgn:
  - Domain d1rgnm_: 1rgn M: [97443]
    Other proteins in same PDB: d1rgnh1, d1rgnh2, d1rgnl_
    complexed with bcl, bph, fe, lda, po4, spo, u10
30. Domain for 1rqk:
  - Domain d1rqkm_: 1rqk M: [97749]
    Other proteins in same PDB: d1rqkh1, d1rqkh2, d1rqkl_
    complexed with bcl, bph, cdl, fe, lda, sp2, u10
31. Domain for 1rvj:
  - Domain d1rvjm_: 1rvj M: [97927]
    Other proteins in same PDB: d1rvjh1, d1rvjh2, d1rvjl_
    complexed with bcl, bph, cdl, fe2, lda, po4, spo, u10; mutant
32. Domain for 1ry5:
  - Domain d1ry5m_: 1ry5 M: [98089]
    Other proteins in same PDB: d1ry5h1, d1ry5h2, d1ry5l_
    complexed with bcl, bph, cdl, fe2, gol, k, lda, po4, spo, u10; mutant
33. Domain for 1rzh:
  - Domain d1rzhm_: 1rzh M: [98165]
    Other proteins in same PDB: d1rzhh1, d1rzhh2, d1rzhl_
    complexed with bcl, bph, cdl, fe2, gol, hto, lda, po4, spo, u10; mutant
34. Domains for 1rzz:
  1. Domain d1rzzm_: 1rzz M: [98241]
    Other proteins in same PDB: d1rzzh1, d1rzzh2, d1rzzl_, d1rzzr_, d1rzzt1, d1rzzt2
  2. Domain d1rzzs_: 1rzz S: [98243]
    Other proteins in same PDB: d1rzzh1, d1rzzh2, d1rzzl_, d1rzzr_, d1rzzt1, d1rzzt2
    complexed with bcl, bph, fe2, lda, spo, u10; mutant
35. Domains for 1s00:
  1. Domain d1s00m_: 1s00 M: [98249]
    Other proteins in same PDB: d1s00h1, d1s00h2, d1s00l_, d1s00r_, d1s00t1, d1s00t2
  2. Domain d1s00s_: 1s00 S: [98251]
    Other proteins in same PDB: d1s00h1, d1s00h2, d1s00l_, d1s00r_, d1s00t1, d1s00t2
    complexed with bcl, bph, fe2, lda, spo, u10; mutant
36. Domain for 1umx:
  - Domain d1umxm_: 1umx M: [107964]
    Other proteins in same PDB: d1umxh1, d1umxh2, d1umxl_
    complexed with bcl, bpb, fe, lda, po4, spn, u10; mutant
37. Domain for 1yst:
  - Domain d1ystm_: 1yst M: [43510]
    Other proteins in same PDB: d1ysth1, d1ysth2, d1ystl_
    complexed with bcl, bph, mn, spo, u10
38. Domain for 1z9k:
  - Domain d1z9kb1: 1z9k B:1-302 [124767]
    Other proteins in same PDB: d1z9ka1
    automatically matched to d2rcrm_
    complexed with bcl, bph, fe, mn, u10
39. Domain for 2bnp:
  - Domain d2bnpb1: 2bnp B:1-302 [128848]
    Other proteins in same PDB: d2bnpa1
    automatically matched to d2rcrm_
    complexed with bcl, bh1, cl, fe2, mst, po4, u10
40. Domain for 2bns:
  - Domain d2bnsb1: 2bns B:1-302 [128856]
    Other proteins in same PDB: d2bnsa1
    automatically matched to d2rcrm_
    complexed with bcl, bh1, cl, fe2, mst, po4, u10
41. Domain for 2boz:
  - Domain d2bozm1: 2boz M:1-303 [145004]
    Other proteins in same PDB: d2bozl1
    complexed with bcl, bh1, d10, fe, lda, po4, spn, u10; mutant
42. Domain for 2gmr:
  - Domain d2gmrm1: 2gmr M:4-300 [135393]
    Other proteins in same PDB: d2gmrl1
    automatically matched to d2rcrm_
    complexed with bcl, bph, fe2, lda, spn, u10; mutant
43. Domain for 2gnu:
  - Domain d2gnum1: 2gnu M:4-300 [135420]
    Other proteins in same PDB: d2gnul1
    automatically matched to d2rcrm_
    complexed with bcl, bph, cdl, cl, fe2, lda, u10
44. Domain for 2hg3:
  - Domain d2hg3m1: 2hg3 M:1-302 [136392]
    Other proteins in same PDB: d2hg3l1
    automatically matched to d2rcrm_
    complexed with bcl, bph, cdl, fe, gol, hto, k, lda, pc9, po4, u10
45. Domain for 2hg9:
  - Domain d2hg9m1: 2hg9 M:1-302 [136395]
    Other proteins in same PDB: d2hg9l1
    automatically matched to d2rcrm_
    complexed with bcl, bph, cdl, cl, fe, gol, k, lda, pc7, pck, po4, u10
46. Domain for 2hh1:
  - Domain d2hh1m1: 2hh1 M:1-302 [136467]
    Other proteins in same PDB: d2hh1l1
    automatically matched to d2rcrm_
    complexed with bcl, bph, cdl, fe, gol, hto, k, lda, pc7, pc9, po4, u10
47. Domain for 2hhk:
  - Domain d2hhkm1: 2hhk M:1-302 [136500]
    Other proteins in same PDB: d2hhkl1
    automatically matched to d2rcrm_
    complexed with bcl, bph, cdl, cl, fe, gol, k, lda, pgk, pgt, po4, u10
48. Domain for 2hit:
  - Domain d2hitm1: 2hit M:1-302 [136532]
    Other proteins in same PDB: d2hitl1
    automatically matched to d2rcrm_
    complexed with bcl, bph, cdl, cl, fe, gol, k, lda, pev, pew, po4, u10
49. Domain for 2hj6:
  - Domain d2hj6m1: 2hj6 M:1-302 [136537]
    Other proteins in same PDB: d2hj6l1
    automatically matched to d2rcrm_
    complexed with bcl, bph, cdl, fe, gol, hto, k, lda, po4, ps2, u10
50. Domain for 2j8c:
  - Domain d2j8cm1: 2j8c M:1-303 [147910]
    Other proteins in same PDB: d2j8cl1
    automatically matched to d2rcrm_
    complexed with bcl, bph, cdl, fe, ggd, gol, hto, lda, pc1, po4, spo, u10
51. Domain for 2j8d:
  - Domain d2j8dm1: 2j8d M:1-303 [147912]
    Other proteins in same PDB: d2j8dl1
    automatically matched to d2rcrm_
    complexed with bcl, bph, cdl, fe, gol, hto, lda, po4, spo, u10
52. Domain for 2rcr:
  - Domain d2rcrm_: 2rcr M: [43507]
    Other proteins in same PDB: d2rcrh1, d2rcrh2, d2rcrl_
    complexed with bcl, bpa, fe, uq
53. Domain for 2uws:
  - Domain d2uwsm1: 2uws M:1-303 [152222]
    Other proteins in same PDB: d2uwsl1
    automatically matched to d2rcrm_
    complexed with bcl, bph, fe, gol, lda, po4, spo, u10, uq2
54. Domain for 2uwt:
  - Domain d2uwtm1: 2uwt M:1-303 [152224]
    Other proteins in same PDB: d2uwtl1
    automatically matched to d2rcrm_
    complexed with bcl, bph, fe, gol, hto, lda, po4, spo, u10, uq2
55. Domain for 2uwu:
  - Domain d2uwum1: 2uwu M:1-303 [152226]
    Other proteins in same PDB: d2uwul1
    automatically matched to d2rcrm_
    complexed with bcl, bph, cdn, fe, gol, hto, lda, po4, spo, u10, uq2
56. Domain for 2uwv:
  - Domain d2uwvm1: 2uwv M:1-303 [152228]
    Other proteins in same PDB: d2uwvl1
    automatically matched to d2rcrm_
    complexed with bcl, bph, fe, gol, hto, lda, po4, spo, u10, uq2
57. Domain for 2uww:
  - Domain d2uwwm1: 2uww M:1-303 [152230]
    Other proteins in same PDB: d2uwwl1
    automatically matched to d2rcrm_
    complexed with bcl, bph, cdn, fe, gol, hto, lda, po4, spo, u10, uq2
58. Domain for 2ux3:
  - Domain d2ux3m1: 2ux3 M:1-303 [152253]
    Other proteins in same PDB: d2ux3l1
    automatically matched to d2rcrm_
    complexed with bcl, bph, cdn, fe, gol, hto, lda, po4, spo, u10, uq2
59. Domain for 2ux4:
  - Domain d2ux4m1: 2ux4 M:1-303 [152255]
    Other proteins in same PDB: d2ux4l1
    automatically matched to d2rcrm_
    complexed with bcl, bph, cdn, fe, gol, hto, lda, po4, spo, u10, uq2
60. Domain for 2ux5:
  - Domain d2ux5m1: 2ux5 M:1-303 [152257]
    Other proteins in same PDB: d2ux5l1
    automatically matched to d2rcrm_
    complexed with bcl, bph, cdn, fe, gol, hto, lda, po4, spo, u10, uq2
61. Domain for 2uxj:
  - Domain d2uxjm1: 2uxj M:1-303 [152303]
    Other proteins in same PDB: d2uxjl1
    automatically matched to d2rcrm_
    complexed with bcl, bph, cdn, fe, gol, hto, lda, po4, spo, u10, uq2
62. Domain for 2uxk:
  - Domain d2uxkm1: 2uxk M:1-303 [152305]
    Other proteins in same PDB: d2uxkl1
    automatically matched to d2rcrm_
    complexed with bcl, bph, cdn, fe, gol, hto, lda, po4, spo, u10, uq2
63. Domain for 2uxl:
  - Domain d2uxlm1: 2uxl M:1-303 [152307]
    Other proteins in same PDB: d2uxll1
    automatically matched to d2rcrm_
    complexed with bcl, bph, fe, gol, hto, lda, spo, u10, uq2
64. Domain for 2uxm:
  - Domain d2uxmm1: 2uxm M:1-303 [152309]
    Other proteins in same PDB: d2uxml1
    automatically matched to d2rcrm_
    complexed with bcl, bph, fe, gol, hto, lda, po4, spo, u10, uq2
65. Domain for 4rcr:
  - Domain d4rcrm_: 4rcr M: [43513]
    Other proteins in same PDB: d4rcrh1, d4rcrh2, d4rcrl_
    complexed with bcl, bog, bph, fe, u10

Rhodopseudomonas viridis [TaxId:1079] [81478] (11 PDB entries)

Domain for 1dxr:
- Domain d1dxrm_: 1dxr M: [43432]
  Other proteins in same PDB: d1dxrc_, d1dxrh1, d1dxrh2, d1dxrl_
  complexed with bcb, bpb, fe2, hec, lda, mq9, mst, ns5, so4; mutant
Domain for 1prc:
- Domain d1prcm_: 1prc M: [43444]
  Other proteins in same PDB: d1prcc_, d1prch1, d1prch2, d1prcl_
  complexed with bcl, bpb, fe, hem, lda, mq7, ns1, so4, uq1
Domain for 1r2c:
- Domain d1r2cm_: 1r2c M: [96863]
  Other proteins in same PDB: d1r2cc_, d1r2ch1, d1r2ch2, d1r2cl_
  complexed with 7mq, bcb, bpb, fe2, hem, lda, ns5, so4, uq2

Domain for 2i5n:

Domain d2i5nm1: 2i5n M:1-323 [137067]
Other proteins in same PDB: d2i5nc1, d2i5nh1, d2i5nh2, d2i5nl1
automatically matched to d1dxrm_
complexed with bcb, bpb, fe2, hec, hto, lda, mq9, ns5, so4, unl, uq1

Domain for 2prc:
- Domain d2prcm_: 2prc M: [43447]
  Other proteins in same PDB: d2prcc_, d2prch1, d2prch2, d2prcl_
  complexed with 7mq, bcb, bpb, fe2, hem, lda, ns5, so4, uq2
Domain for 3d38:
- Domain d3d38m1: 3d38 M:1-323 [157277]
  Other proteins in same PDB: d3d38c1, d3d38h1, d3d38h2, d3d38l1
  automatically matched to d1dxrm_
  complexed with bcb, bpb, fe2, hec, hto, lda, mq9, ns5, so4, uq1
Domain for 3prc:
- Domain d3prcm_: 3prc M: [43438]
  Other proteins in same PDB: d3prcc_, d3prch1, d3prch2, d3prcl_
  complexed with 7mq, bcb, bpb, fe2, hem, lda, ns5, so4
Domain for 4prc:
- Domain d4prcm_: 4prc M: [43450]
  Other proteins in same PDB: d4prcc_, d4prch1, d4prch2, d4prcl_
  complexed with 7mq, bcb, bpb, fe2, hem, lda, ns5, sma, so4
Domain for 5prc:
- Domain d5prcm_: 5prc M: [43441]
  Other proteins in same PDB: d5prcc_, d5prch1, d5prch2, d5prcl_
  complexed with 7mq, atz, bcb, bpb, fe2, hem, lda, ns5, so4
Domain for 6prc:
- Domain d6prcm_: 6prc M: [43435]
  Other proteins in same PDB: d6prcc_, d6prch1, d6prch2, d6prcl_
  complexed with 7mq, bcb, bpb, ceb, fe2, hem, lda, ns5, so4
Domain for 7prc:
- Domain d7prcm_: 7prc M: [43453]
  Other proteins in same PDB: d7prcc_, d7prch1, d7prch2, d7prcl_
  complexed with 7mq, bcb, bpb, cet, fe2, hem, lda, ns5, so4

Thermochromatium tepidum [TaxId:1050] [81480] (1 PDB entry)
- Domain for 1eys:
  - Domain d1eysm_: 1eys M: [43516]
    Other proteins in same PDB: d1eysc_, d1eysh1, d1eysh2, d1eysl_
    complexed with bcl, bgl, bph, crt, fe, hem, lda, mq8, pef

More info for Protein M (medium) subunit from f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits

Timeline for Protein M (medium) subunit from f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits :

Protein M (medium) subunit from f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits appears in SCOP 1.73
Protein M (medium) subunit from f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits appears in SCOP 1.75A

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