SCOP 1.63: Protein: M (medium) subunit

Lineage for Protein: M (medium) subunit

Root: SCOP 1.63
Class f: Membrane and cell surface proteins and peptides [56835] (34 folds)
Fold f.26: Bacterial photosystem II reaction centre, L and M subunits [81484] (1 superfamily)
five transmembrane helices forming a sheet-like structure
Superfamily f.26.1: Bacterial photosystem II reaction centre, L and M subunits [81483] (1 family)
Family f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits [81482] (2 proteins)
L and M are probably related to each other
Protein M (medium) subunit [81481] (3 species)

Species:

Rhodobacter sphaeroides [TaxId:1063] [81479] (29 PDB entries)
1. Domains for 1aig:
  1. Domain d1aigm_: 1aig M: [43483]
    Other proteins in same PDB: d1aigh1, d1aigh2, d1aigl_, d1aign_, d1aigp1, d1aigp2
  2. Domain d1aigo_: 1aig O: [43486]
    Other proteins in same PDB: d1aigh1, d1aigh2, d1aigl_, d1aign_, d1aigp1, d1aigp2
    complexed with bcl, bph, fe2, u10
2. Domains for 1aij:
  1. Domain d1aijm_: 1aij M: [43462]
    Other proteins in same PDB: d1aijh1, d1aijh2, d1aijl_, d1aijr_, d1aijt1, d1aijt2
  2. Domain d1aijs_: 1aij S: [43465]
    Other proteins in same PDB: d1aijh1, d1aijh2, d1aijl_, d1aijr_, d1aijt1, d1aijt2
    complexed with bcl, bph, fe2, lda, u10
3. Domains for 1ds8:
  1. Domain d1ds8m_: 1ds8 M: [43471]
    Other proteins in same PDB: d1ds8h1, d1ds8h2, d1ds8l_, d1ds8r_, d1ds8t1, d1ds8t2
  2. Domain d1ds8s_: 1ds8 S: [43474]
    Other proteins in same PDB: d1ds8h1, d1ds8h2, d1ds8l_, d1ds8r_, d1ds8t1, d1ds8t2
    complexed with bcl, bph, cd, cl, fe2, lda, u10
4. Domains for 1dv3:
  1. Domain d1dv3m_: 1dv3 M: [43477]
    Other proteins in same PDB: d1dv3h1, d1dv3h2, d1dv3l_, d1dv3r_, d1dv3t1, d1dv3t2
  2. Domain d1dv3s_: 1dv3 S: [43480]
    Other proteins in same PDB: d1dv3h1, d1dv3h2, d1dv3l_, d1dv3r_, d1dv3t1, d1dv3t2
    complexed with bcl, bph, cd, cl, fe2, lda, u10
5. Domains for 1dv6:
  1. Domain d1dv6m_: 1dv6 M: [43489]
    Other proteins in same PDB: d1dv6h1, d1dv6h2, d1dv6l_, d1dv6r_, d1dv6t1, d1dv6t2
  2. Domain d1dv6s_: 1dv6 S: [43492]
    Other proteins in same PDB: d1dv6h1, d1dv6h2, d1dv6l_, d1dv6r_, d1dv6t1, d1dv6t2
    complexed with bcl, bph, cl, fe2, lda, u10, zn
6. Domain for 1e14:
  - Domain d1e14m_: 1e14 M: [43498]
    Other proteins in same PDB: d1e14h1, d1e14h2, d1e14l_
    complexed with bcl, bph, cdl, fe, lda, spn, u10; mutant
7. Domain for 1e6d:
  - Domain d1e6dm_: 1e6d M: [43459]
    Other proteins in same PDB: d1e6dh1, d1e6dh2, d1e6dl_
    complexed with bcl, bph, fe, lda, po4, spn, u10; mutant
8. Domain for 1f6n:
  - Domain d1f6nm_: 1f6n M: [59661]
    Other proteins in same PDB: d1f6nh1, d1f6nh2, d1f6nl_
    complexed with bcl, bph, fe, lda, po4, spo, u10; mutant
9. Domain for 1fnp:
  - Domain d1fnpm_: 1fnp M: [59915]
    Other proteins in same PDB: d1fnph1, d1fnph2, d1fnpl_
    complexed with bcl, bph, fe, lda, po4, spo, u10; mutant
10. Domain for 1fnq:
  - Domain d1fnqm_: 1fnq M: [59919]
    Other proteins in same PDB: d1fnqh1, d1fnqh2, d1fnql_
    complexed with bcl, bph, fe, lda, po4, spo, u10; mutant
11. Domain for 1jgw:
  - Domain d1jgwm_: 1jgw M: [63021]
    Other proteins in same PDB: d1jgwh1, d1jgwh2, d1jgwl_
    complexed with bcl, bph, cdl, fe, spo, u10; mutant
12. Domain for 1jgx:
  - Domain d1jgxm_: 1jgx M: [63025]
    Other proteins in same PDB: d1jgxh1, d1jgxh2, d1jgxl_
    complexed with bcl, bph, fe, spo, u10; mutant
13. Domain for 1jgy:
  - Domain d1jgym_: 1jgy M: [63029]
    Other proteins in same PDB: d1jgyh1, d1jgyh2, d1jgyl_
    complexed with bcl, bph, cdl, fe, spo, u10; mutant
14. Domain for 1jgz:
  - Domain d1jgzm_: 1jgz M: [63033]
    Other proteins in same PDB: d1jgzh1, d1jgzh2, d1jgzl_
    complexed with bcl, bph, cdl, fe, spo, u10; mutant
15. Domain for 1jh0:
  - Domain d1jh0m_: 1jh0 M: [63037]
    Other proteins in same PDB: d1jh0h1, d1jh0h2, d1jh0l_
    complexed with bcl, bph, fe, spo, u10; mutant
16. Domain for 1k6l:
  - Domain d1k6lm_: 1k6l M: [72087]
    Other proteins in same PDB: d1k6lh1, d1k6lh2, d1k6ll_
    complexed with bcl, bph, cdl, fe, lda, spn, u10
17. Domain for 1k6n:
  - Domain d1k6nm_: 1k6n M: [72091]
    Other proteins in same PDB: d1k6nh1, d1k6nh2, d1k6nl_
    complexed with bcl, bph, cdl, fe, lda, spn, u10; mutant
18. Domain for 1kby:
  - Domain d1kbym_: 1kby M: [77330]
    Other proteins in same PDB: d1kbyh1, d1kbyh2, d1kbyl_
    complexed with bcl, bph, cdl, cl, fe, spo, u10; mutant
19. Domain for 1l9b:
  - Domain d1l9bm_: 1l9b M: [73715]
    Other proteins in same PDB: d1l9bc_, d1l9bh1, d1l9bh2, d1l9bl_
    complexed with bcl, bph, cl, fe2, hem, hto, lda, na, u10
20. Domains for 1l9j:
  1. Domain d1l9jm_: 1l9j M: [73727]
    Other proteins in same PDB: d1l9jc_, d1l9jd_, d1l9jh1, d1l9jh2, d1l9jl_, d1l9jr_, d1l9jt1, d1l9jt2
  2. Domain d1l9js_: 1l9j S: [73729]
    Other proteins in same PDB: d1l9jc_, d1l9jd_, d1l9jh1, d1l9jh2, d1l9jl_, d1l9jr_, d1l9jt1, d1l9jt2
    complexed with bcl, bph, cl, fe2, hem, lda, u10
21. Domain for 1m3x:
  - Domain d1m3xm_: 1m3x M: [74436]
    Other proteins in same PDB: d1m3xh1, d1m3xh2, d1m3xl_
    complexed with bcl, bph, cdl, cl, fe, ggd, pc2, spo, u10
22. Domain for 1mps:
  - Domain d1mpsm_: 1mps M: [43468]
    Other proteins in same PDB: d1mpsh1, d1mpsh2, d1mpsl_
    complexed with bcl, bph, fe2, lda, po4, spn, u10; mutant
23. Domain for 1pcr:
  - Domain d1pcrm_: 1pcr M: [43495]
    Other proteins in same PDB: d1pcrh1, d1pcrh2, d1pcrl_
    complexed with bcl, bph, fe, lda, po4, spo, u10
24. Domain for 1pss:
  - Domain d1pssm_: 1pss M: [43501]
    Other proteins in same PDB: d1pssh1, d1pssh2, d1pssl_
    complexed with bcl, bph, crt, fe, u10
25. Domain for 1pst:
  - Domain d1pstm_: 1pst M: [43504]
    Other proteins in same PDB: d1psth1, d1psth2, d1pstl_
    complexed with bcl, bph, crt, fe, u10; mutant
26. Domain for 1qov:
  - Domain d1qovm_: 1qov M: [43456]
    Other proteins in same PDB: d1qovh1, d1qovh2, d1qovl_
27. Domain for 1yst:
  - Domain d1ystm_: 1yst M: [43510]
    Other proteins in same PDB: d1ysth1, d1ysth2, d1ystl_
    complexed with bcl, bph, mn, spo, u10
28. Domain for 2rcr:
  - Domain d2rcrm_: 2rcr M: [43507]
    Other proteins in same PDB: d2rcrh1, d2rcrh2, d2rcrl_
    complexed with bcl, bpa, fe, uq
29. Domain for 4rcr:
  - Domain d4rcrm_: 4rcr M: [43513]
    Other proteins in same PDB: d4rcrh1, d4rcrh2, d4rcrl_
    complexed with bcl, bog, bph, fe, u10
Rhodopseudomonas viridis [TaxId:1079] [81478] (8 PDB entries)
1. Domain for 1dxr:
  - Domain d1dxrm_: 1dxr M: [43432]
    Other proteins in same PDB: d1dxrc_, d1dxrh1, d1dxrh2, d1dxrl_
    complexed with bcb, bpb, fe2, hec, lda, mq9, mst, ns5, so4; mutant
2. Domain for 1prc:
  - Domain d1prcm_: 1prc M: [43444]
    Other proteins in same PDB: d1prcc_, d1prch1, d1prch2, d1prcl_
    complexed with bcl, bpb, fe, hem, lda, mq7, ns1, so4, uq1
3. Domain for 2prc:
  - Domain d2prcm_: 2prc M: [43447]
    Other proteins in same PDB: d2prcc_, d2prch1, d2prch2, d2prcl_
    complexed with 7mq, bcb, bpb, fe2, hem, lda, ns5, so4, uq2
4. Domain for 3prc:
  - Domain d3prcm_: 3prc M: [43438]
    Other proteins in same PDB: d3prcc_, d3prch1, d3prch2, d3prcl_
    complexed with 7mq, bcb, bpb, fe2, hem, lda, ns5, so4
5. Domain for 4prc:
  - Domain d4prcm_: 4prc M: [43450]
    Other proteins in same PDB: d4prcc_, d4prch1, d4prch2, d4prcl_
    complexed with 7mq, bcb, bpb, fe2, hem, lda, ns5, sma, so4
6. Domain for 5prc:
  - Domain d5prcm_: 5prc M: [43441]
    Other proteins in same PDB: d5prcc_, d5prch1, d5prch2, d5prcl_
    complexed with 7mq, atz, bcb, bpb, fe2, hem, lda, ns5, so4
7. Domain for 6prc:
  - Domain d6prcm_: 6prc M: [43435]
    Other proteins in same PDB: d6prcc_, d6prch1, d6prch2, d6prcl_
    complexed with 7mq, bcb, bpb, ceb, fe2, hem, lda, ns5, so4
8. Domain for 7prc:
  - Domain d7prcm_: 7prc M: [43453]
    Other proteins in same PDB: d7prcc_, d7prch1, d7prch2, d7prcl_
    complexed with 7mq, bcb, bpb, cet, fe2, hem, lda, ns5, so4
Thermochromatium tepidum [TaxId:1050] [81480] (1 PDB entry)
- Domain for 1eys:
  - Domain d1eysm_: 1eys M: [43516]
    Other proteins in same PDB: d1eysc_, d1eysh1, d1eysh2, d1eysl_
    complexed with bcl, bgl, bph, crt, fe, hem, lda, mq8, pef

More info for Protein M (medium) subunit from f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits

Timeline for Protein M (medium) subunit from f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits:

Protein M (medium) subunit from f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits is new in SCOP 1.63
Protein M (medium) subunit from f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits appears in SCOP 1.65
Protein M (medium) subunit from f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits appears in the current release, SCOPe 2.08