Lineage for Protein: Bacterial aa3 type cytochrome c oxidase subunit II

  1. Root: SCOPe 2.06
  2. 2250849Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
  3. 2252855Fold f.17: Transmembrane helix hairpin [81334] (6 superfamilies)
    two antiparallel transmembrane helices
  4. 2252897Superfamily f.17.2: Cytochrome c oxidase subunit II-like, transmembrane region [81464] (2 families) (S)
  5. 2252898Family f.17.2.1: Cytochrome c oxidase subunit II-like, transmembrane region [81463] (5 proteins)
  6. 2252899Protein Bacterial aa3 type cytochrome c oxidase subunit II [81458] (2 species)

Species:

  1. 2252900Paracoccus denitrificans [TaxId:266] [81456] (4 PDB entries)
    1. Domain for 1ar1:
    2. Domain for 1qle:
    3. Domain for 3ehb:
    4. Domain for 3hb3:
  2. 2252905Rhodobacter sphaeroides [TaxId:1063] [81457] (6 PDB entries)
    1. Domains for 1m56:
      1. 2252914Domain d1m56b2: 1m56 B:30-129 [74473]
        Other proteins in same PDB: d1m56a_, d1m56b1, d1m56c_, d1m56d_, d1m56g_, d1m56h1, d1m56i_, d1m56j_
        complexed with ca, cu, hea, mg, peh
      2. 2252915Domain d1m56h2: 1m56 H:30-129 [74478]
        Other proteins in same PDB: d1m56a_, d1m56b1, d1m56c_, d1m56d_, d1m56g_, d1m56h1, d1m56i_, d1m56j_
        complexed with ca, cu, hea, mg, peh
    2. Domains for 1m57:
      1. 2252916Domain d1m57b2: 1m57 B:30-129 [74483]
        Other proteins in same PDB: d1m57a_, d1m57b1, d1m57c_, d1m57d_, d1m57g_, d1m57h1, d1m57i_, d1m57j_
        complexed with ca, cu, hea, mg, peh; mutant
      2. 2252917Domain d1m57h2: 1m57 H:30-129 [74488]
        Other proteins in same PDB: d1m57a_, d1m57b1, d1m57c_, d1m57d_, d1m57g_, d1m57h1, d1m57i_, d1m57j_
        complexed with ca, cu, hea, mg, peh; mutant
    3. Domains for 2gsm:
      1. 2252910Domain d2gsmb2: 2gsm B:30-129 [135591]
        Other proteins in same PDB: d2gsma_, d2gsmb1, d2gsmb3, d2gsmc_, d2gsmd1, d2gsmd3
        automated match to d3fyeb1
        complexed with ca, cd, cu, dmu, hea, mg, oh, trd
      2. 2252911Domain d2gsmd2: 2gsm D:30-129 [135594]
        Other proteins in same PDB: d2gsma_, d2gsmb1, d2gsmb3, d2gsmc_, d2gsmd1, d2gsmd3
        automated match to d3fyeb1
        complexed with ca, cd, cu, dmu, hea, mg, oh, trd
    4. Domains for 3dtu:
      1. 2252906Domain d3dtub2: 3dtu B:29-129 [157858]
        Other proteins in same PDB: d3dtua_, d3dtub1, d3dtub3, d3dtuc_, d3dtud1, d3dtud3
        automated match to d3fyeb1
        complexed with ca, cd, cu, dmu, dxc, hea, hto, mg, oh, po4, trd
      2. 2252907Domain d3dtud2: 3dtu D:28-129 [157861]
        Other proteins in same PDB: d3dtua_, d3dtub1, d3dtub3, d3dtuc_, d3dtud1, d3dtud3
        automated match to d3fyeb1
        complexed with ca, cd, cu, dmu, dxc, hea, hto, mg, oh, po4, trd
    5. Domains for 3fye:
      1. 2252908Domain d3fyeb1: 3fye B:30-129 [232210]
        Other proteins in same PDB: d3fyea_, d3fyeb2, d3fyeb3, d3fyec_, d3fyed2, d3fyed3
        automated match to d3dtub2
        complexed with ca, cd, cu1, dmu, hea, hto, mg, trd, unx
      2. 2252909Domain d3fyed1: 3fye D:30-129 [239279]
        Other proteins in same PDB: d3fyea_, d3fyeb2, d3fyeb3, d3fyec_, d3fyed2, d3fyed3
        automated match to d3fyeb1
        complexed with ca, cd, cu1, dmu, hea, hto, mg, trd, unx
    6. Domains for 3fyi:
      1. 2252912Domain d3fyib1: 3fyi B:30-129 [239281]
        Other proteins in same PDB: d3fyia_, d3fyib2, d3fyib3, d3fyic_, d3fyid2, d3fyid3
        automated match to d3fyeb1
        complexed with ca, cd, cu1, cyn, dmu, hea, hto, mg, trd
      2. 2252913Domain d3fyid1: 3fyi D:30-129 [239283]
        Other proteins in same PDB: d3fyia_, d3fyib2, d3fyib3, d3fyic_, d3fyid2, d3fyid3
        automated match to d3fyeb1
        complexed with ca, cd, cu1, cyn, dmu, hea, hto, mg, trd

More info for Protein Bacterial aa3 type cytochrome c oxidase subunit II from f.17.2.1: Cytochrome c oxidase subunit II-like, transmembrane region

Timeline for Protein Bacterial aa3 type cytochrome c oxidase subunit II from f.17.2.1: Cytochrome c oxidase subunit II-like, transmembrane region:

  • Protein Bacterial aa3 type cytochrome c oxidase subunit II from f.17.2.1: Cytochrome c oxidase subunit II-like, transmembrane region first appeared in SCOP 1.63
  • Protein Bacterial aa3 type cytochrome c oxidase subunit II from f.17.2.1: Cytochrome c oxidase subunit II-like, transmembrane region appears in SCOPe 2.05
  • Protein Bacterial aa3 type cytochrome c oxidase subunit II from f.17.2.1: Cytochrome c oxidase subunit II-like, transmembrane region appears in the current release, SCOPe 2.07