Lineage for Protein: Nitrogenase iron-molybdenum protein, alpha chain

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2143226Fold c.92: Chelatase-like [53799] (3 superfamilies)
    duplication: tandem repeat of two domains; 3 layers (a/b/a); parallel beta-sheet of 4 strands, order 2134
  4. 2143333Superfamily c.92.2: "Helical backbone" metal receptor [53807] (5 families) (S)
    contains a long alpha helical insertion in the interdomain linker
  5. 2143391Family c.92.2.3: Nitrogenase iron-molybdenum protein [53816] (3 protein domains)
    contains three domains of this fold; "Helical backbone" holds domains 2 and 3
    both chains are homologous; the inter-chain arrangement of domains 1 is similar to the intra-chain arrangement of domains 2 and 3
    automatically mapped to Pfam PF00148
  6. 2143392Protein Nitrogenase iron-molybdenum protein, alpha chain [81402] (3 species)

Species:

  1. 2143393Azotobacter vinelandii [TaxId:354] [81398] (14 PDB entries)
    1. Domains for 1fp4:
      1. 2143408Domain d1fp4a_: 1fp4 A: [76187]
        Other proteins in same PDB: d1fp4b_, d1fp4d_
        complexed with ca, cfm, clp, hca; mutant
      2. 2143409Domain d1fp4c_: 1fp4 C: [76189]
        Other proteins in same PDB: d1fp4b_, d1fp4d_
        complexed with ca, cfm, clp, hca; mutant
    2. Domains for 1g20:
      1. 2143402Domain d1g20a_: 1g20 A: [35613]
        Other proteins in same PDB: d1g20b_, d1g20d_, d1g20e_, d1g20f_, d1g20g_, d1g20h_
        complexed with ca, cfm, clf, hca, sf4
      2. 2143403Domain d1g20c_: 1g20 C: [35615]
        Other proteins in same PDB: d1g20b_, d1g20d_, d1g20e_, d1g20f_, d1g20g_, d1g20h_
        complexed with ca, cfm, clf, hca, sf4
    3. Domains for 1g21:
      1. 2143417Domain d1g21a_: 1g21 A: [35621]
        Other proteins in same PDB: d1g21b_, d1g21d_, d1g21e_, d1g21f_, d1g21g_, d1g21h_
        complexed with atp, ca, cfm, clf, hca, mg, sf4
      2. 2143418Domain d1g21c_: 1g21 C: [35623]
        Other proteins in same PDB: d1g21b_, d1g21d_, d1g21e_, d1g21f_, d1g21g_, d1g21h_
        complexed with atp, ca, cfm, clf, hca, mg, sf4
    4. Domain for 1l5h:
      • 2143414Domain d1l5ha_: 1l5h A: [73590]
        Other proteins in same PDB: d1l5hb_
        FeMo-cofactor deficient
        complexed with ca, clf
    5. Domains for 1m1n:
      1. 2143394Domain d1m1na_: 1m1n A: [78417]
        Other proteins in same PDB: d1m1nb_, d1m1nd_, d1m1nf_, d1m1nh_
        complexed with ca, cfn, clf, hca
      2. 2143395Domain d1m1nc_: 1m1n C: [78419]
        Other proteins in same PDB: d1m1nb_, d1m1nd_, d1m1nf_, d1m1nh_
        complexed with ca, cfn, clf, hca
      3. 2143396Domain d1m1ne_: 1m1n E: [78421]
        Other proteins in same PDB: d1m1nb_, d1m1nd_, d1m1nf_, d1m1nh_
        complexed with ca, cfn, clf, hca
      4. 2143397Domain d1m1ng_: 1m1n G: [78423]
        Other proteins in same PDB: d1m1nb_, d1m1nd_, d1m1nf_, d1m1nh_
        complexed with ca, cfn, clf, hca
    6. Domains for 1m1y:
      1. 2143419Domain d1m1ya_: 1m1y A: [78441]
        Other proteins in same PDB: d1m1yb_, d1m1yd_, d1m1ye_, d1m1yf_, d1m1yg_, d1m1yh_, d1m1yj_, d1m1yl_, d1m1ym_, d1m1yn_, d1m1yo_, d1m1yp_
        chemically crosslinked structure
        complexed with ca, cfm, clf, hca, sf4
      2. 2143420Domain d1m1yc_: 1m1y C: [78443]
        Other proteins in same PDB: d1m1yb_, d1m1yd_, d1m1ye_, d1m1yf_, d1m1yg_, d1m1yh_, d1m1yj_, d1m1yl_, d1m1ym_, d1m1yn_, d1m1yo_, d1m1yp_
        chemically crosslinked structure
        complexed with ca, cfm, clf, hca, sf4
      3. 2143421Domain d1m1yi_: 1m1y I: [78449]
        Other proteins in same PDB: d1m1yb_, d1m1yd_, d1m1ye_, d1m1yf_, d1m1yg_, d1m1yh_, d1m1yj_, d1m1yl_, d1m1ym_, d1m1yn_, d1m1yo_, d1m1yp_
        chemically crosslinked structure
        complexed with ca, cfm, clf, hca, sf4
      4. 2143422Domain d1m1yk_: 1m1y K: [78451]
        Other proteins in same PDB: d1m1yb_, d1m1yd_, d1m1ye_, d1m1yf_, d1m1yg_, d1m1yh_, d1m1yj_, d1m1yl_, d1m1ym_, d1m1yn_, d1m1yo_, d1m1yp_
        chemically crosslinked structure
        complexed with ca, cfm, clf, hca, sf4
    7. Domains for 1m34:
      1. 2143404Domain d1m34a_: 1m34 A: [78515]
        Other proteins in same PDB: d1m34b_, d1m34d_, d1m34e_, d1m34f_, d1m34g_, d1m34h_, d1m34j_, d1m34l_, d1m34m_, d1m34n_, d1m34o_, d1m34p_
        complexed with adp, alf, ca, cfm, clf, hca, mg, sf4
      2. 2143405Domain d1m34c_: 1m34 C: [78517]
        Other proteins in same PDB: d1m34b_, d1m34d_, d1m34e_, d1m34f_, d1m34g_, d1m34h_, d1m34j_, d1m34l_, d1m34m_, d1m34n_, d1m34o_, d1m34p_
        complexed with adp, alf, ca, cfm, clf, hca, mg, sf4
      3. 2143406Domain d1m34i_: 1m34 I: [78523]
        Other proteins in same PDB: d1m34b_, d1m34d_, d1m34e_, d1m34f_, d1m34g_, d1m34h_, d1m34j_, d1m34l_, d1m34m_, d1m34n_, d1m34o_, d1m34p_
        complexed with adp, alf, ca, cfm, clf, hca, mg, sf4
      4. 2143407Domain d1m34k_: 1m34 K: [78525]
        Other proteins in same PDB: d1m34b_, d1m34d_, d1m34e_, d1m34f_, d1m34g_, d1m34h_, d1m34j_, d1m34l_, d1m34m_, d1m34n_, d1m34o_, d1m34p_
        complexed with adp, alf, ca, cfm, clf, hca, mg, sf4
    8. Domains for 1n2c:
      1. 2143415Domain d1n2ca_: 1n2c A: [35617]
        Other proteins in same PDB: d1n2cb_, d1n2cd_, d1n2ce_, d1n2cf_, d1n2cg_, d1n2ch_
        complexed with adp, alf, ca, cfm, clf, hca, mg, sf4
      2. 2143416Domain d1n2cc_: 1n2c C: [35619]
        Other proteins in same PDB: d1n2cb_, d1n2cd_, d1n2ce_, d1n2cf_, d1n2cg_, d1n2ch_
        complexed with adp, alf, ca, cfm, clf, hca, mg, sf4
    9. Domains for 2min:
      1. 2143400Domain d2mina_: 2min A: [35609]
        Other proteins in same PDB: d2minb_, d2mind_
        complexed with ca, cfm, clf, hca
      2. 2143401Domain d2minc_: 2min C: [35611]
        Other proteins in same PDB: d2minb_, d2mind_
        complexed with ca, cfm, clf, hca
    10. Domains for 3min:
      1. 2143398Domain d3mina_: 3min A: [35605]
        Other proteins in same PDB: d3minb_, d3mind_
        complexed with ca, cfm, clf, hca
      2. 2143399Domain d3minc_: 3min C: [35607]
        Other proteins in same PDB: d3minb_, d3mind_
        complexed with ca, cfm, clf, hca
    11. Domains for 4wna:
      1. 2143412Domain d4wnaa_: 4wna A: [270767]
        Other proteins in same PDB: d4wnab_, d4wnad_
        automated match to d1g20a_
        complexed with clf, fe, hca, ics, xe
      2. 2143413Domain d4wnac_: 4wna C: [270781]
        Other proteins in same PDB: d4wnab_, d4wnad_
        automated match to d1g20a_
        complexed with clf, fe, hca, ics, xe
    12. Domains for 4xpi:
      1. 2143410Domain d4xpia_: 4xpi A: [278203]
        Other proteins in same PDB: d4xpib_, d4xpid_
        automated match to d1m34a_
        complexed with 1cl, ca, gol, hca, ics, trs
      2. 2143411Domain d4xpic_: 4xpi C: [278204]
        Other proteins in same PDB: d4xpib_, d4xpid_
        automated match to d1m34a_
        complexed with 1cl, ca, gol, hca, ics, trs
    13. Domains for 5ijy:
      1. 2287351Domain d5ijyc_: 5ijy C: [330652]
        Other proteins in same PDB: d5ijyb_, d5ijyd_
        automated match to d1g20a_
        complexed with clf, fe, hca, ics
      2. 2287407Domain d5ijya_: 5ijy A: [330708]
        Other proteins in same PDB: d5ijyb_, d5ijyd_
        automated match to d1g20a_
        complexed with clf, fe, hca, ics
    14. Domains for 5vq4:
      1. 2293793Domain d5vq4a_: 5vq4 A: [337094]
        Other proteins in same PDB: d5vq4b_, d5vq4d_
        automated match to d1g20a_
        complexed with clf, fe, hca, ics
      2. 2293843Domain d5vq4c_: 5vq4 C: [337144]
        Other proteins in same PDB: d5vq4b_, d5vq4d_
        automated match to d1g20a_
        complexed with clf, fe, hca, ics
  2. 2143423Clostridium pasteurianum [TaxId:1501] [81396] (4 PDB entries)
    1. Domains for 1mio:
      1. 2143426Domain d1mioa_: 1mio A: [35601]
        Other proteins in same PDB: d1miob_, d1miod_
        complexed with ca, cfm, clp, hca
      2. 2143427Domain d1mioc_: 1mio C: [35603]
        Other proteins in same PDB: d1miob_, d1miod_
        complexed with ca, cfm, clp, hca
    2. Domains for 4wn9:
      1. 2143424Domain d4wn9a_: 4wn9 A: [270776]
        Other proteins in same PDB: d4wn9b_, d4wn9d_
        automated match to d1mioa_
        complexed with clf, fe, hca, ics, pro, xe
      2. 2143425Domain d4wn9c_: 4wn9 C: [270778]
        Other proteins in same PDB: d4wn9b_, d4wn9d_
        automated match to d1mioa_
        complexed with clf, fe, hca, ics, pro, xe
    3. Domains for 5vpw:
      1. 2293792Domain d5vpwa_: 5vpw A: [337093]
        Other proteins in same PDB: d5vpwb_, d5vpwd_
        automated match to d1mioa_
        complexed with clf, fe2, hca, ics
      2. 2293798Domain d5vpwc_: 5vpw C: [337099]
        Other proteins in same PDB: d5vpwb_, d5vpwd_
        automated match to d1mioa_
        complexed with clf, fe2, hca, ics
    4. Domains for 5vq3:
      1. 2293794Domain d5vq3c_: 5vq3 C: [337095]
        Other proteins in same PDB: d5vq3b_, d5vq3d_
        automated match to d1mioa_
        complexed with clf, fe2, hca, ics
      2. 2293801Domain d5vq3a_: 5vq3 A: [337102]
        Other proteins in same PDB: d5vq3b_, d5vq3d_
        automated match to d1mioa_
        complexed with clf, fe2, hca, ics
  3. 2143428Klebsiella pneumoniae [TaxId:573] [81400] (4 PDB entries)
    1. Domains for 1h1l:
      1. 2143435Domain d1h1la_: 1h1l A: [70851]
        Other proteins in same PDB: d1h1lb_, d1h1ld_
        complexed with cfm, cit, cl, clf, mg; mutant
      2. 2143436Domain d1h1lc_: 1h1l C: [70853]
        Other proteins in same PDB: d1h1lb_, d1h1ld_
        complexed with cfm, cit, cl, clf, mg; mutant
    2. Domains for 1qgu:
      1. 2143431Domain d1qgua_: 1qgu A: [35625]
        Other proteins in same PDB: d1qgub_, d1qgud_
        complexed with cfm, cl, clf, edo, hca, mg
      2. 2143432Domain d1qguc_: 1qgu C: [35627]
        Other proteins in same PDB: d1qgub_, d1qgud_
        complexed with cfm, cl, clf, edo, hca, mg
    3. Domains for 1qh1:
      1. 2143433Domain d1qh1a_: 1qh1 A: [35629]
        Other proteins in same PDB: d1qh1b_, d1qh1d_
        complexed with cfm, cl, clf, edo, hca, mg
      2. 2143434Domain d1qh1c_: 1qh1 C: [35631]
        Other proteins in same PDB: d1qh1b_, d1qh1d_
        complexed with cfm, cl, clf, edo, hca, mg
    4. Domains for 1qh8:
      1. 2143429Domain d1qh8a_: 1qh8 A: [35633]
        Other proteins in same PDB: d1qh8b_, d1qh8d_
        complexed with cfm, cl, clf, edo, hca, mg
      2. 2143430Domain d1qh8c_: 1qh8 C: [35635]
        Other proteins in same PDB: d1qh8b_, d1qh8d_
        complexed with cfm, cl, clf, edo, hca, mg

More info for Protein Nitrogenase iron-molybdenum protein, alpha chain from c.92.2.3: Nitrogenase iron-molybdenum protein

Timeline for Protein Nitrogenase iron-molybdenum protein, alpha chain from c.92.2.3: Nitrogenase iron-molybdenum protein:

  • Protein Nitrogenase iron-molybdenum protein, alpha chain from c.92.2.3: Nitrogenase iron-molybdenum protein first appeared in SCOP 1.63
  • Protein Nitrogenase iron-molybdenum protein, alpha chain from c.92.2.3: Nitrogenase iron-molybdenum protein appears in SCOPe 2.05