Lineage for Species: Azotobacter vinelandii [TaxId: 354]

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2519619Fold c.92: Chelatase-like [53799] (3 superfamilies)
    duplication: tandem repeat of two domains; 3 layers (a/b/a); parallel beta-sheet of 4 strands, order 2134
  4. 2519730Superfamily c.92.2: "Helical backbone" metal receptor [53807] (5 families) (S)
    contains a long alpha helical insertion in the interdomain linker
  5. 2519806Family c.92.2.3: Nitrogenase iron-molybdenum protein [53816] (3 proteins)
    contains three domains of this fold; "Helical backbone" holds domains 2 and 3
    both chains are homologous; the inter-chain arrangement of domains 1 is similar to the intra-chain arrangement of domains 2 and 3
    automatically mapped to Pfam PF00148
  6. 2519892Protein Nitrogenase iron-molybdenum protein, beta chain [81401] (3 species)
    both chains are homologous; the inter-chain arrangement of domains 1 is similar to the intra-chain arrangement of domains 2 and 3
  7. 2519893Species Azotobacter vinelandii [TaxId:354] [81397] (40 PDB entries)

PDB entries in Species: Azotobacter vinelandii [TaxId: 354]:

  1. Domain(s) for 1fp4:
    1. 2519971Domain d1fp4b_: 1fp4 B: [76188]
      Other proteins in same PDB: d1fp4a_, d1fp4c_
      complexed with ca, cfm, clp, hca; mutant
    2. 2519972Domain d1fp4d_: 1fp4 D: [76190]
      Other proteins in same PDB: d1fp4a_, d1fp4c_
      complexed with ca, cfm, clp, hca; mutant
  2. Domain(s) for 1g20:
    1. 2519928Domain d1g20b_: 1g20 B: [35614]
      Other proteins in same PDB: d1g20a_, d1g20c_, d1g20e_, d1g20f_, d1g20g_, d1g20h_
      complexed with ca, cfm, clf, hca, sf4
    2. 2519929Domain d1g20d_: 1g20 D: [35616]
      Other proteins in same PDB: d1g20a_, d1g20c_, d1g20e_, d1g20f_, d1g20g_, d1g20h_
      complexed with ca, cfm, clf, hca, sf4
  3. Domain(s) for 1g21:
    1. 2519973Domain d1g21b_: 1g21 B: [35622]
      Other proteins in same PDB: d1g21a_, d1g21c_, d1g21e_, d1g21f_, d1g21g_, d1g21h_
      complexed with atp, ca, cfm, clf, hca, mg, sf4
    2. 2519974Domain d1g21d_: 1g21 D: [35624]
      Other proteins in same PDB: d1g21a_, d1g21c_, d1g21e_, d1g21f_, d1g21g_, d1g21h_
      complexed with atp, ca, cfm, clf, hca, mg, sf4
  4. Domain(s) for 1l5h:
    • 2519948Domain d1l5hb_: 1l5h B: [73591]
      Other proteins in same PDB: d1l5ha_
      FeMo-cofactor deficient
      complexed with ca, clf
  5. Domain(s) for 1m1n:
    1. 2519896Domain d1m1nb_: 1m1n B: [78418]
      Other proteins in same PDB: d1m1na_, d1m1nc_, d1m1ne_, d1m1ng_
      complexed with ca, cfn, clf, hca
    2. 2519897Domain d1m1nd_: 1m1n D: [78420]
      Other proteins in same PDB: d1m1na_, d1m1nc_, d1m1ne_, d1m1ng_
      complexed with ca, cfn, clf, hca
    3. 2519898Domain d1m1nf_: 1m1n F: [78422]
      Other proteins in same PDB: d1m1na_, d1m1nc_, d1m1ne_, d1m1ng_
      complexed with ca, cfn, clf, hca
    4. 2519899Domain d1m1nh_: 1m1n H: [78424]
      Other proteins in same PDB: d1m1na_, d1m1nc_, d1m1ne_, d1m1ng_
      complexed with ca, cfn, clf, hca
  6. Domain(s) for 1m1y:
    1. 2519975Domain d1m1yb_: 1m1y B: [78442]
      Other proteins in same PDB: d1m1ya_, d1m1yc_, d1m1ye_, d1m1yf_, d1m1yg_, d1m1yh_, d1m1yi_, d1m1yk_, d1m1ym_, d1m1yn_, d1m1yo_, d1m1yp_
      chemically crosslinked structure
      complexed with ca, cfm, clf, hca, sf4
    2. 2519976Domain d1m1yd_: 1m1y D: [78444]
      Other proteins in same PDB: d1m1ya_, d1m1yc_, d1m1ye_, d1m1yf_, d1m1yg_, d1m1yh_, d1m1yi_, d1m1yk_, d1m1ym_, d1m1yn_, d1m1yo_, d1m1yp_
      chemically crosslinked structure
      complexed with ca, cfm, clf, hca, sf4
    3. 2519977Domain d1m1yj_: 1m1y J: [78450]
      Other proteins in same PDB: d1m1ya_, d1m1yc_, d1m1ye_, d1m1yf_, d1m1yg_, d1m1yh_, d1m1yi_, d1m1yk_, d1m1ym_, d1m1yn_, d1m1yo_, d1m1yp_
      chemically crosslinked structure
      complexed with ca, cfm, clf, hca, sf4
    4. 2519978Domain d1m1yl_: 1m1y L: [78452]
      Other proteins in same PDB: d1m1ya_, d1m1yc_, d1m1ye_, d1m1yf_, d1m1yg_, d1m1yh_, d1m1yi_, d1m1yk_, d1m1ym_, d1m1yn_, d1m1yo_, d1m1yp_
      chemically crosslinked structure
      complexed with ca, cfm, clf, hca, sf4
  7. Domain(s) for 1m34:
    1. 2519932Domain d1m34b_: 1m34 B: [78516]
      Other proteins in same PDB: d1m34a_, d1m34c_, d1m34e_, d1m34f_, d1m34g_, d1m34h_, d1m34i_, d1m34k_, d1m34m_, d1m34n_, d1m34o_, d1m34p_
      complexed with adp, alf, ca, cfm, clf, hca, mg, sf4
    2. 2519933Domain d1m34d_: 1m34 D: [78518]
      Other proteins in same PDB: d1m34a_, d1m34c_, d1m34e_, d1m34f_, d1m34g_, d1m34h_, d1m34i_, d1m34k_, d1m34m_, d1m34n_, d1m34o_, d1m34p_
      complexed with adp, alf, ca, cfm, clf, hca, mg, sf4
    3. 2519934Domain d1m34j_: 1m34 J: [78524]
      Other proteins in same PDB: d1m34a_, d1m34c_, d1m34e_, d1m34f_, d1m34g_, d1m34h_, d1m34i_, d1m34k_, d1m34m_, d1m34n_, d1m34o_, d1m34p_
      complexed with adp, alf, ca, cfm, clf, hca, mg, sf4
    4. 2519935Domain d1m34l_: 1m34 L: [78526]
      Other proteins in same PDB: d1m34a_, d1m34c_, d1m34e_, d1m34f_, d1m34g_, d1m34h_, d1m34i_, d1m34k_, d1m34m_, d1m34n_, d1m34o_, d1m34p_
      complexed with adp, alf, ca, cfm, clf, hca, mg, sf4
  8. Domain(s) for 1n2c:
    1. 2519969Domain d1n2cb_: 1n2c B: [35618]
      Other proteins in same PDB: d1n2ca_, d1n2cc_, d1n2ce_, d1n2cf_, d1n2cg_, d1n2ch_
      complexed with adp, alf, ca, cfm, clf, hca, mg, sf4
    2. 2519970Domain d1n2cd_: 1n2c D: [35620]
      Other proteins in same PDB: d1n2ca_, d1n2cc_, d1n2ce_, d1n2cf_, d1n2cg_, d1n2ch_
      complexed with adp, alf, ca, cfm, clf, hca, mg, sf4
  9. Domain(s) for 2afh:
    1. 2519910Domain d2afhb_: 2afh B: [126680]
      Other proteins in same PDB: d2afha_, d2afhc_, d2afhe_, d2afhf_
      automated match to d1fp4b_
      complexed with 1pe, ca, cfn, clf, hca, na, p6g, peg, pg4, pge, sf4, trs
    2. 2519911Domain d2afhd_: 2afh D: [126682]
      Other proteins in same PDB: d2afha_, d2afhc_, d2afhe_, d2afhf_
      automated match to d1fp4b_
      complexed with 1pe, ca, cfn, clf, hca, na, p6g, peg, pg4, pge, sf4, trs
  10. Domain(s) for 2afk:
    1. 2519953Domain d2afkb_: 2afk B: [126695]
      Other proteins in same PDB: d2afka_, d2afkc_, d2afke_, d2afkf_, d2afkg_, d2afkh_
      automated match to d1fp4b_
      complexed with acp, ca, cfn, clf, hca, mg, sf4
    2. 2519954Domain d2afkd_: 2afk D: [126697]
      Other proteins in same PDB: d2afka_, d2afkc_, d2afke_, d2afkf_, d2afkg_, d2afkh_
      automated match to d1fp4b_
      complexed with acp, ca, cfn, clf, hca, mg, sf4
  11. Domain(s) for 2min:
    1. 2519922Domain d2minb_: 2min B: [35610]
      Other proteins in same PDB: d2mina_, d2minc_
      complexed with ca, cfm, clf, hca
    2. 2519923Domain d2mind_: 2min D: [35612]
      Other proteins in same PDB: d2mina_, d2minc_
      complexed with ca, cfm, clf, hca
  12. Domain(s) for 3k1a:
    1. 2519955Domain d3k1ab_: 3k1a B: [178944]
      Other proteins in same PDB: d3k1aa_, d3k1ac_
      automated match to d1fp4b_
      complexed with ca, cfn, clf, hca
    2. 2519956Domain d3k1ad_: 3k1a D: [178946]
      Other proteins in same PDB: d3k1aa_, d3k1ac_
      automated match to d1fp4b_
      complexed with ca, cfn, clf, hca
  13. Domain(s) for 3min:
    1. 2519916Domain d3minb_: 3min B: [35606]
      Other proteins in same PDB: d3mina_, d3minc_
      complexed with ca, cfm, clf, hca
    2. 2519917Domain d3mind_: 3min D: [35608]
      Other proteins in same PDB: d3mina_, d3minc_
      complexed with ca, cfm, clf, hca
  14. Domain(s) for 3u7q:
    1. 2519894Domain d3u7qb_: 3u7q B: [186100]
      Other proteins in same PDB: d3u7qa_, d3u7qc_
      automated match to d1fp4b_
      complexed with 1cl, ca, clf, hca, ics, imd, mg
    2. 2519895Domain d3u7qd_: 3u7q D: [186102]
      Other proteins in same PDB: d3u7qa_, d3u7qc_
      automated match to d1fp4b_
      complexed with 1cl, ca, clf, hca, ics, imd, mg
  15. Domain(s) for 4nd8:
    1. 2519918Domain d4nd8b_: 4nd8 B: [236072]
      Other proteins in same PDB: d4nd8a_, d4nd8c_
      automated match to d1g20b_
      complexed with 1cl, fe, hca, ics
    2. 2519919Domain d4nd8d_: 4nd8 D: [236073]
      Other proteins in same PDB: d4nd8a_, d4nd8c_
      automated match to d1g20b_
      complexed with 1cl, fe, hca, ics
  16. Domain(s) for 4tku:
    1. 2519902Domain d4tkub_: 4tku B: [260023]
      Other proteins in same PDB: d4tkua_, d4tkuc_
      automated match to d1g20b_
      complexed with cl, clf, fe2, hca, ics, imd
    2. 2519903Domain d4tkud_: 4tku D: [260024]
      Other proteins in same PDB: d4tkua_, d4tkuc_
      automated match to d1g20b_
      complexed with cl, clf, fe2, hca, ics, imd
  17. Domain(s) for 4tkv:
    1. 2519904Domain d4tkvb_: 4tkv B: [260026]
      Other proteins in same PDB: d4tkva_, d4tkvc_
      automated match to d1g20b_
      complexed with clf, cmo, fe2, hca, ice, imd
    2. 2519905Domain d4tkvd_: 4tkv D: [260025]
      Other proteins in same PDB: d4tkva_, d4tkvc_
      automated match to d1g20b_
      complexed with clf, cmo, fe2, hca, ice, imd
  18. Domain(s) for 4wna:
    1. 2519946Domain d4wnab_: 4wna B: [270772]
      Other proteins in same PDB: d4wnaa_, d4wnac_
      automated match to d1g20b_
      complexed with clf, fe, hca, ics, xe
    2. 2519947Domain d4wnad_: 4wna D: [270777]
      Other proteins in same PDB: d4wnaa_, d4wnac_
      automated match to d1g20b_
      complexed with clf, fe, hca, ics, xe
  19. Domain(s) for 4wza:
    1. 2519938Domain d4wzab_: 4wza B: [269129]
      Other proteins in same PDB: d4wzaa_, d4wzac_, d4wzae_, d4wzaf_, d4wzag_, d4wzah_
      automated match to d1m1nb_
      complexed with acp, adp, clf, fe, hca, ics, mg, sf4
    2. 2519939Domain d4wzad_: 4wza D: [269125]
      Other proteins in same PDB: d4wzaa_, d4wzac_, d4wzae_, d4wzaf_, d4wzag_, d4wzah_
      automated match to d1m1nb_
      complexed with acp, adp, clf, fe, hca, ics, mg, sf4
  20. Domain(s) for 4wzb:
    1. 2519965Domain d4wzbb_: 4wzb B: [269533]
      Other proteins in same PDB: d4wzba_, d4wzbc_, d4wzbe_, d4wzbf_, d4wzbg_, d4wzbh_
      automated match to d1m1nb_
      complexed with acp, clf, fe2, hca, ics, mg, sf4
    2. 2519966Domain d4wzbd_: 4wzb D: [269531]
      Other proteins in same PDB: d4wzba_, d4wzbc_, d4wzbe_, d4wzbf_, d4wzbg_, d4wzbh_
      automated match to d1m1nb_
      complexed with acp, clf, fe2, hca, ics, mg, sf4
  21. Domain(s) for 4xpi:
    1. 2519942Domain d4xpib_: 4xpi B: [278200]
      Other proteins in same PDB: d4xpia_, d4xpic_
      automated match to d1qh8b_
      complexed with 1cl, ca, gol, hca, ics, trs
    2. 2519943Domain d4xpid_: 4xpi D: [278205]
      Other proteins in same PDB: d4xpia_, d4xpic_
      automated match to d1qh8b_
      complexed with 1cl, ca, gol, hca, ics, trs
  22. Domain(s) for 5ijy:
    1. 2519951Domain d5ijyb_: 5ijy B: [330760]
      Other proteins in same PDB: d5ijya_, d5ijyc_
      automated match to d1g20b_
      complexed with clf, fe, hca, ics
    2. 2519952Domain d5ijyd_: 5ijy D: [330707]
      Other proteins in same PDB: d5ijya_, d5ijyc_
      automated match to d1g20b_
      complexed with clf, fe, hca, ics
  23. Domain(s) for 5vq4:
    1. 2519967Domain d5vq4b_: 5vq4 B: [337114]
      Other proteins in same PDB: d5vq4a_, d5vq4c_
      automated match to d1g20b_
      complexed with clf, fe, hca, ics
    2. 2519968Domain d5vq4d_: 5vq4 D: [337146]
      Other proteins in same PDB: d5vq4a_, d5vq4c_
      automated match to d1g20b_
      complexed with clf, fe, hca, ics
  24. Domain(s) for 6bbl:
    1. 2519912Domain d6bblb_: 6bbl B: [349515]
      Other proteins in same PDB: d6bbla_, d6bblc_
      automated match to d1g20b_
      complexed with 1cl, c2h, fe, hca, ics, imd, mg
    2. 2519913Domain d6bbld_: 6bbl D: [349540]
      Other proteins in same PDB: d6bbla_, d6bblc_
      automated match to d1g20b_
      complexed with 1cl, c2h, fe, hca, ics, imd, mg
  25. Domain(s) for 6cdk:
    1. 2519949Domain d6cdkb_: 6cdk B: [352010]
      Other proteins in same PDB: d6cdka_, d6cdkc_
      automated match to d1g20b_
      complexed with clf, fe, hca, ics
    2. 2519950Domain d6cdkd_: 6cdk D: [351950]
      Other proteins in same PDB: d6cdka_, d6cdkc_
      automated match to d1g20b_
      complexed with clf, fe, hca, ics
  26. Domain(s) for 6o7l:
    1. 2519961Domain d6o7lb_: 6o7l B: [371016]
      Other proteins in same PDB: d6o7la_, d6o7lc_
      automated match to d4xpib_
      complexed with clf, fe, hca, ics; mutant
    2. 2519962Domain d6o7ld_: 6o7l D: [371052]
      Other proteins in same PDB: d6o7la_, d6o7lc_
      automated match to d4xpib_
      complexed with clf, fe, hca, ics; mutant
  27. Domain(s) for 6o7m:
    1. 2519906Domain d6o7mb_: 6o7m B: [371012]
      Other proteins in same PDB: d6o7ma_, d6o7mc_
      automated match to d4xpib_
      complexed with clf, fe, hca, ics; mutant
    2. 2519907Domain d6o7md_: 6o7m D: [371011]
      Other proteins in same PDB: d6o7ma_, d6o7mc_
      automated match to d4xpib_
      complexed with clf, fe, hca, ics; mutant
  28. Domain(s) for 6o7n:
    1. 2519926Domain d6o7nb_: 6o7n B: [371031]
      Other proteins in same PDB: d6o7na_, d6o7nc_
      automated match to d4xpib_
      complexed with clf, fe, hca, ics; mutant
    2. 2519927Domain d6o7nd_: 6o7n D: [371001]
      Other proteins in same PDB: d6o7na_, d6o7nc_
      automated match to d4xpib_
      complexed with clf, fe, hca, ics; mutant
  29. Domain(s) for 6o7o:
    1. 2519936Domain d6o7ob_: 6o7o B: [371086]
      Other proteins in same PDB: d6o7oa_, d6o7oc_
      automated match to d4xpib_
      complexed with clf, fe, hca, ics; mutant
    2. 2519937Domain d6o7od_: 6o7o D: [371054]
      Other proteins in same PDB: d6o7oa_, d6o7oc_
      automated match to d4xpib_
      complexed with clf, fe, hca, ics; mutant
  30. Domain(s) for 6o7p:
    1. 2519920Domain d6o7pb_: 6o7p B: [371077]
      Other proteins in same PDB: d6o7pa_, d6o7pc_
      automated match to d4xpib_
      complexed with clf, fe, hca, ics; mutant
    2. 2519921Domain d6o7pd_: 6o7p D: [371072]
      Other proteins in same PDB: d6o7pa_, d6o7pc_
      automated match to d4xpib_
      complexed with clf, fe, hca, ics; mutant
  31. Domain(s) for 6o7q:
    1. 2519944Domain d6o7qb_: 6o7q B: [371025]
      Other proteins in same PDB: d6o7qa_, d6o7qc_
      automated match to d4xpib_
      complexed with clf, fe, hca, ics; mutant
    2. 2519945Domain d6o7qd_: 6o7q D: [370985]
      Other proteins in same PDB: d6o7qa_, d6o7qc_
      automated match to d4xpib_
      complexed with clf, fe, hca, ics; mutant
  32. Domain(s) for 6o7r:
    1. 2519959Domain d6o7rb_: 6o7r B: [371059]
      Other proteins in same PDB: d6o7ra_, d6o7rc_
      automated match to d4xpib_
      complexed with clf, fe, hca, ics; mutant
    2. 2519960Domain d6o7rd_: 6o7r D: [371076]
      Other proteins in same PDB: d6o7ra_, d6o7rc_
      automated match to d4xpib_
      complexed with clf, fe, hca, ics; mutant
  33. Domain(s) for 6o7s:
    1. 2519957Domain d6o7sb_: 6o7s B: [371219]
      Other proteins in same PDB: d6o7sa_, d6o7sc_
      automated match to d4xpib_
      complexed with fe, hca, ics, lpj, na; mutant
    2. 2519958Domain d6o7sd_: 6o7s D: [371112]
      Other proteins in same PDB: d6o7sa_, d6o7sc_
      automated match to d4xpib_
      complexed with fe, hca, ics, lpj, na; mutant
  34. Domain(s) for 6op1:
    1. 2519914Domain d6op1b_: 6op1 B: [373036]
      Other proteins in same PDB: d6op1a_, d6op1c_
      automated match to d1m1nb_
      complexed with ca, clf, cmo, hca, ics, imd, mg
    2. 2519915Domain d6op1d_: 6op1 D: [373032]
      Other proteins in same PDB: d6op1a_, d6op1c_
      automated match to d1m1nb_
      complexed with ca, clf, cmo, hca, ics, imd, mg
  35. Domain(s) for 6op2:
    1. 2519940Domain d6op2b_: 6op2 B: [373045]
      Other proteins in same PDB: d6op2a_, d6op2c_
      automated match to d1m1nb_
      complexed with ca, clf, hca, ics, imd, mg, se
    2. 2519941Domain d6op2d_: 6op2 D: [373074]
      Other proteins in same PDB: d6op2a_, d6op2c_
      automated match to d1m1nb_
      complexed with ca, clf, hca, ics, imd, mg, se
  36. Domain(s) for 6op3:
    1. 2519908Domain d6op3b_: 6op3 B: [373000]
      Other proteins in same PDB: d6op3a_, d6op3c_
      automated match to d1m1nb_
      complexed with ca, clf, hca, ics, imd, mg, se
    2. 2519909Domain d6op3d_: 6op3 D: [373009]
      Other proteins in same PDB: d6op3a_, d6op3c_
      automated match to d1m1nb_
      complexed with ca, clf, hca, ics, imd, mg, se
  37. Domain(s) for 6op4:
    1. 2519963Domain d6op4b_: 6op4 B: [372999]
      Other proteins in same PDB: d6op4a_, d6op4c_
      automated match to d1m1nb_
      complexed with ca, clf, hca, ics, imd, mg
    2. 2519964Domain d6op4d_: 6op4 D: [373070]
      Other proteins in same PDB: d6op4a_, d6op4c_
      automated match to d1m1nb_
      complexed with ca, clf, hca, ics, imd, mg
  38. Domain(s) for 6ug0:
    1. 2519930Domain d6ug0b_: 6ug0 B: [388262]
      Other proteins in same PDB: d6ug0a_, d6ug0c_
      automated match to d1g20b_
      complexed with 1cl, fe, gol, h2s, hca, hdz, ice, icz, mo, pge
    2. 2519931Domain d6ug0d_: 6ug0 D: [388314]
      Other proteins in same PDB: d6ug0a_, d6ug0c_
      automated match to d1g20b_
      complexed with 1cl, fe, gol, h2s, hca, hdz, ice, icz, mo, pge
  39. Domain(s) for 6vxt:
    1. 2519924Domain d6vxtb_: 6vxt B: [388297]
      Other proteins in same PDB: d6vxta_, d6vxtc_
      automated match to d1g20b_
      complexed with clf, fe, gol, h2s, hca, ics, mo
    2. 2519925Domain d6vxtd_: 6vxt D: [388287]
      Other proteins in same PDB: d6vxta_, d6vxtc_
      automated match to d1g20b_
      complexed with clf, fe, gol, h2s, hca, ics, mo
  40. Domain(s) for 7jrf:
    1. 2519900Domain d7jrfb_: 7jrf B: [402059]
      Other proteins in same PDB: d7jrfa_, d7jrfc_
      automated match to d1g20b_
      complexed with ca, clf, cmo, h2s, hca, ice, imd, mg
    2. 2519901Domain d7jrfd_: 7jrf D: [402128]
      Other proteins in same PDB: d7jrfa_, d7jrfc_
      automated match to d1g20b_
      complexed with ca, clf, cmo, h2s, hca, ice, imd, mg

More info for Species Azotobacter vinelandii [TaxId:354] from c.92.2.3 Nitrogenase iron-molybdenum protein, beta chain

Timeline for Species Azotobacter vinelandii [TaxId:354] from c.92.2.3 Nitrogenase iron-molybdenum protein, beta chain: