Lineage for Protein: Fumarate reductase subunit FrdD

  1. Root: SCOPe 2.07
  2. 2575216Class f: Membrane and cell surface proteins and peptides [56835] (60 folds)
  3. 2577736Fold f.21: Heme-binding four-helical bundle [81344] (3 superfamilies)
    core: four transmembrane helices, up-and-down bundle, binds one or two heme groups in between the helices
  4. 2577828Superfamily f.21.2: Fumarate reductase respiratory complex transmembrane subunits [81343] (2 families) (S)
    two distinct families: in one family the common fold is contained in a single-chain subunit, in the other it is formed by two chains
  5. 2577848Family f.21.2.2: Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD) [81373] (7 proteins)
    consists of two homologous non-identical subunits that form a heterodimer; may or may not contain heme groups
  6. 2577866Protein Fumarate reductase subunit FrdD [81372] (2 species)

Species:

  1. 2577867Escherichia coli [TaxId:536056] [192449] (1 PDB entry)
  2. 2577870Escherichia coli [TaxId:562] [81371] (6 PDB entries)
    is not known to bind heme
    1. Domains for 1kf6:
      1. 2577871Domain d1kf6d_: 1kf6 D: [72400]
        Other proteins in same PDB: d1kf6a1, d1kf6a2, d1kf6a3, d1kf6b1, d1kf6b2, d1kf6c_, d1kf6m1, d1kf6m2, d1kf6m3, d1kf6n1, d1kf6n2, d1kf6o_
        complexed with 1pe, act, ce1, f3s, fad, fes, hqo, k, oaa, sf4
      2. 2577872Domain d1kf6p_: 1kf6 P: [72407]
        Other proteins in same PDB: d1kf6a1, d1kf6a2, d1kf6a3, d1kf6b1, d1kf6b2, d1kf6c_, d1kf6m1, d1kf6m2, d1kf6m3, d1kf6n1, d1kf6n2, d1kf6o_
        complexed with 1pe, act, ce1, f3s, fad, fes, hqo, k, oaa, sf4
    2. Domains for 1kfy:
      1. 2577877Domain d1kfyd_: 1kfy D: [72433]
        Other proteins in same PDB: d1kfya1, d1kfya2, d1kfya3, d1kfyb1, d1kfyb2, d1kfyc_, d1kfym1, d1kfym2, d1kfym3, d1kfyn1, d1kfyn2, d1kfyo_
        complexed with brs, ce1, f3s, fad, fes, oaa, sf4
      2. 2577878Domain d1kfyp_: 1kfy P: [72440]
        Other proteins in same PDB: d1kfya1, d1kfya2, d1kfya3, d1kfyb1, d1kfyb2, d1kfyc_, d1kfym1, d1kfym2, d1kfym3, d1kfyn1, d1kfyn2, d1kfyo_
        complexed with brs, ce1, f3s, fad, fes, oaa, sf4
    3. Domains for 1l0v:
      1. 2577875Domain d1l0vd_: 1l0v D: [73418]
        Other proteins in same PDB: d1l0va1, d1l0va2, d1l0va3, d1l0vb1, d1l0vb2, d1l0vc_, d1l0vm1, d1l0vm2, d1l0vm3, d1l0vn1, d1l0vn2, d1l0vo_
        complexed with ce1, f3s, fad, fes, mq7, oaa, sf4
      2. 2577876Domain d1l0vp_: 1l0v P: [73425]
        Other proteins in same PDB: d1l0va1, d1l0va2, d1l0va3, d1l0vb1, d1l0vb2, d1l0vc_, d1l0vm1, d1l0vm2, d1l0vm3, d1l0vn1, d1l0vn2, d1l0vo_
        complexed with ce1, f3s, fad, fes, mq7, oaa, sf4
    4. Domains for 2b76:
      1. 2577879Domain d2b76d1: 2b76 D:0-118 [128015]
        Other proteins in same PDB: d2b76a1, d2b76a2, d2b76a3, d2b76b1, d2b76b2, d2b76c1, d2b76m1, d2b76m2, d2b76m3, d2b76n1, d2b76n2, d2b76o1
        automatically matched to d1kf6d_
        complexed with f3s, fad, fes, flc, mq7, sf4; mutant
      2. 2577880Domain d2b76p1: 2b76 P:0-118 [128022]
        Other proteins in same PDB: d2b76a1, d2b76a2, d2b76a3, d2b76b1, d2b76b2, d2b76c1, d2b76m1, d2b76m2, d2b76m3, d2b76n1, d2b76n2, d2b76o1
        automatically matched to d1kf6d_
        complexed with f3s, fad, fes, flc, mq7, sf4; mutant
    5. Domains for 3cir:
      1. 2577881Domain d3cird1: 3cir D:0-118 [156685]
        Other proteins in same PDB: d3cira1, d3cira2, d3cira3, d3cirb1, d3cirb2, d3circ1, d3cirm1, d3cirm2, d3cirm3, d3cirn1, d3cirn2, d3ciro1
        automatically matched to d1kf6d_
        complexed with f3s, fad, fes, sf4; mutant
      2. 2577882Domain d3cirp1: 3cir P:0-118 [156692]
        Other proteins in same PDB: d3cira1, d3cira2, d3cira3, d3cirb1, d3cirb2, d3circ1, d3cirm1, d3cirm2, d3cirm3, d3cirn1, d3cirn2, d3ciro1
        automatically matched to d1kf6d_
        complexed with f3s, fad, fes, sf4; mutant
    6. Domains for 4kx6:
      1. 2577873Domain d4kx6d_: 4kx6 D: [227515]
        Other proteins in same PDB: d4kx6b1, d4kx6b2, d4kx6c_, d4kx6n1, d4kx6n2, d4kx6o_
        automated match to d1kf6d_
        complexed with f3s, fad, fes, mq7, sf4
      2. 2577874Domain d4kx6p_: 4kx6 P: [227516]
        Other proteins in same PDB: d4kx6b1, d4kx6b2, d4kx6c_, d4kx6n1, d4kx6n2, d4kx6o_
        automated match to d1kf6d_
        complexed with f3s, fad, fes, mq7, sf4

More info for Protein Fumarate reductase subunit FrdD from f.21.2.2: Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)

Timeline for Protein Fumarate reductase subunit FrdD from f.21.2.2: Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD):

  • Protein Fumarate reductase subunit FrdD from f.21.2.2: Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD) first appeared in SCOP 1.63
  • Protein Fumarate reductase subunit FrdD from f.21.2.2: Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD) appears in SCOPe 2.06