SCOPe 2.08: Protein: Class sigma GST

Lineage for Protein: Class sigma GST

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.45: GST C-terminal domain-like [47615] (1 superfamily)
core: 4 helices; bundle, closed, left-handed twist; right-handed superhelix
Superfamily a.45.1: GST C-terminal domain-like [47616] (3 families)
this domains follows the thioredoxin-like N-terminal domain
Family a.45.1.1: Glutathione S-transferase (GST), C-terminal domain [47617] (19 proteins)
Protein Class sigma GST [81351] (5 species)

Species:

Fruit fly (Drosophila melanogaster) [TaxId:7227] [81771] (1 PDB entry)
- Domains for 1m0u:
  1. Domain d1m0ua1: 1m0u A:123-249 [78359]
    Other proteins in same PDB: d1m0ua2, d1m0ub2
    complexed with gsh, so4
  2. Domain d1m0ub1: 1m0u B:123-249 [78361]
    Other proteins in same PDB: d1m0ua2, d1m0ub2
    complexed with gsh, so4

Heligmosomoides polygyrus [TaxId:6339] [109834] (1 PDB entry)
Uniprot Q9NJQ6 # Fragment

Domains for 1tw9:

Domain d1tw9a1: 1tw9 A:78-206 [107381]
Other proteins in same PDB: d1tw9a2, d1tw9a3, d1tw9b2, d1tw9b3, d1tw9c2, d1tw9c3, d1tw9d2, d1tw9d3, d1tw9e2, d1tw9e3, d1tw9f2, d1tw9f3, d1tw9g2, d1tw9g3, d1tw9h2, d1tw9h3

Domain d1tw9b1: 1tw9 B:78-206 [107383]
Other proteins in same PDB: d1tw9a2, d1tw9a3, d1tw9b2, d1tw9b3, d1tw9c2, d1tw9c3, d1tw9d2, d1tw9d3, d1tw9e2, d1tw9e3, d1tw9f2, d1tw9f3, d1tw9g2, d1tw9g3, d1tw9h2, d1tw9h3

Domain d1tw9c1: 1tw9 C:78-206 [107385]
Other proteins in same PDB: d1tw9a2, d1tw9a3, d1tw9b2, d1tw9b3, d1tw9c2, d1tw9c3, d1tw9d2, d1tw9d3, d1tw9e2, d1tw9e3, d1tw9f2, d1tw9f3, d1tw9g2, d1tw9g3, d1tw9h2, d1tw9h3

Domain d1tw9d1: 1tw9 D:78-206 [107387]
Other proteins in same PDB: d1tw9a2, d1tw9a3, d1tw9b2, d1tw9b3, d1tw9c2, d1tw9c3, d1tw9d2, d1tw9d3, d1tw9e2, d1tw9e3, d1tw9f2, d1tw9f3, d1tw9g2, d1tw9g3, d1tw9h2, d1tw9h3

Domain d1tw9e1: 1tw9 E:78-206 [107389]
Other proteins in same PDB: d1tw9a2, d1tw9a3, d1tw9b2, d1tw9b3, d1tw9c2, d1tw9c3, d1tw9d2, d1tw9d3, d1tw9e2, d1tw9e3, d1tw9f2, d1tw9f3, d1tw9g2, d1tw9g3, d1tw9h2, d1tw9h3

Domain d1tw9f1: 1tw9 F:78-206 [107391]
Other proteins in same PDB: d1tw9a2, d1tw9a3, d1tw9b2, d1tw9b3, d1tw9c2, d1tw9c3, d1tw9d2, d1tw9d3, d1tw9e2, d1tw9e3, d1tw9f2, d1tw9f3, d1tw9g2, d1tw9g3, d1tw9h2, d1tw9h3

Domain d1tw9g1: 1tw9 G:78-206 [107393]
Other proteins in same PDB: d1tw9a2, d1tw9a3, d1tw9b2, d1tw9b3, d1tw9c2, d1tw9c3, d1tw9d2, d1tw9d3, d1tw9e2, d1tw9e3, d1tw9f2, d1tw9f3, d1tw9g2, d1tw9g3, d1tw9h2, d1tw9h3

Domain d1tw9h1: 1tw9 H:78-206 [107395]
Other proteins in same PDB: d1tw9a2, d1tw9a3, d1tw9b2, d1tw9b3, d1tw9c2, d1tw9c3, d1tw9d2, d1tw9d3, d1tw9e2, d1tw9e3, d1tw9f2, d1tw9f3, d1tw9g2, d1tw9g3, d1tw9h2, d1tw9h3

Human (Homo sapiens) [TaxId:9606] [89061] (16 PDB entries)
Uniprot O60760; synonym: hematopoietic prostaglandin D synthase
1. Domains for 1iyh:
  1. Domain d1iyha1: 1iyh A:76-199 [83790]
    Other proteins in same PDB: d1iyha2, d1iyhb2, d1iyhc2, d1iyhd2
    complexed with gsh, mg
  2. Domain d1iyhb1: 1iyh B:276-399 [83792]
    Other proteins in same PDB: d1iyha2, d1iyhb2, d1iyhc2, d1iyhd2
    complexed with gsh, mg
  3. Domain d1iyhc1: 1iyh C:476-599 [83794]
    Other proteins in same PDB: d1iyha2, d1iyhb2, d1iyhc2, d1iyhd2
    complexed with gsh, mg
  4. Domain d1iyhd1: 1iyh D:676-799 [83796]
    Other proteins in same PDB: d1iyha2, d1iyhb2, d1iyhc2, d1iyhd2
    complexed with gsh, mg
2. Domains for 1iyi:
  1. Domain d1iyia1: 1iyi A:76-199 [83798]
    Other proteins in same PDB: d1iyia2, d1iyib2, d1iyic2, d1iyid2
    complexed with ca, gsh
  2. Domain d1iyib1: 1iyi B:276-399 [83800]
    Other proteins in same PDB: d1iyia2, d1iyib2, d1iyic2, d1iyid2
    complexed with ca, gsh
  3. Domain d1iyic1: 1iyi C:476-599 [83802]
    Other proteins in same PDB: d1iyia2, d1iyib2, d1iyic2, d1iyid2
    complexed with ca, gsh
  4. Domain d1iyid1: 1iyi D:676-799 [83804]
    Other proteins in same PDB: d1iyia2, d1iyib2, d1iyic2, d1iyid2
    complexed with ca, gsh
3. Domains for 1v40:
  1. Domain d1v40a1: 1v40 A:76-199 [113512]
    Other proteins in same PDB: d1v40a2, d1v40b2, d1v40c2, d1v40d2
    complexed with gol, gsh, mg, o16
  2. Domain d1v40b1: 1v40 B:276-399 [113514]
    Other proteins in same PDB: d1v40a2, d1v40b2, d1v40c2, d1v40d2
    complexed with gol, gsh, mg, o16
  3. Domain d1v40c1: 1v40 C:476-599 [113516]
    Other proteins in same PDB: d1v40a2, d1v40b2, d1v40c2, d1v40d2
    complexed with gol, gsh, mg, o16
  4. Domain d1v40d1: 1v40 D:676-799 [113518]
    Other proteins in same PDB: d1v40a2, d1v40b2, d1v40c2, d1v40d2
    complexed with gol, gsh, mg, o16
4. Domains for 2cvd:
  1. Domain d2cvda1: 2cvd A:76-199 [130861]
    Other proteins in same PDB: d2cvda2, d2cvdb2, d2cvdc2, d2cvdd2
    automated match to d1iyha1
    complexed with gol, gsh, hql, mg
  2. Domain d2cvdb1: 2cvd B:76-199 [130863]
    Other proteins in same PDB: d2cvda2, d2cvdb2, d2cvdc2, d2cvdd2
    automated match to d1iyha1
    complexed with gol, gsh, hql, mg
  3. Domain d2cvdc1: 2cvd C:76-199 [130865]
    Other proteins in same PDB: d2cvda2, d2cvdb2, d2cvdc2, d2cvdd2
    automated match to d1iyha1
    complexed with gol, gsh, hql, mg
  4. Domain d2cvdd1: 2cvd D:76-199 [130867]
    Other proteins in same PDB: d2cvda2, d2cvdb2, d2cvdc2, d2cvdd2
    automated match to d1iyha1
    complexed with gol, gsh, hql, mg
5. Domains for 3ee2:
  1. Domain d3ee2a1: 3ee2 A:76-199 [158117]
    Other proteins in same PDB: d3ee2a2, d3ee2b2
    automated match to d1pd211
    complexed with gsh, mg, nzo
  2. Domain d3ee2b1: 3ee2 B:76-199 [158119]
    Other proteins in same PDB: d3ee2a2, d3ee2b2
    automated match to d1pd211
    complexed with gsh, mg, nzo
6. Domains for 3vi5:
  1. Domain d3vi5a2: 3vi5 A:76-199 [217829]
    Other proteins in same PDB: d3vi5a1, d3vi5b1, d3vi5c1, d3vi5d1
    automated match to d1iyha1
    complexed with ca, gol, gsh, m4m
  2. Domain d3vi5b2: 3vi5 B:276-399 [217831]
    Other proteins in same PDB: d3vi5a1, d3vi5b1, d3vi5c1, d3vi5d1
    automated match to d1iyha1
    complexed with ca, gol, gsh, m4m
  3. Domain d3vi5c2: 3vi5 C:476-599 [217833]
    Other proteins in same PDB: d3vi5a1, d3vi5b1, d3vi5c1, d3vi5d1
    automated match to d1iyha1
    complexed with ca, gol, gsh, m4m
  4. Domain d3vi5d2: 3vi5 D:676-799 [217835]
    Other proteins in same PDB: d3vi5a1, d3vi5b1, d3vi5c1, d3vi5d1
    automated match to d1iyha1
    complexed with ca, gol, gsh, m4m
7. Domains for 3vi7:
  1. Domain d3vi7a2: 3vi7 A:76-199 [217837]
    Other proteins in same PDB: d3vi7a1, d3vi7b1, d3vi7c1, d3vi7d1
    automated match to d1iyha1
    complexed with ca, cbd, gsh
  2. Domain d3vi7b2: 3vi7 B:276-399 [217839]
    Other proteins in same PDB: d3vi7a1, d3vi7b1, d3vi7c1, d3vi7d1
    automated match to d1iyha1
    complexed with ca, cbd, gsh
  3. Domain d3vi7c2: 3vi7 C:476-599 [217841]
    Other proteins in same PDB: d3vi7a1, d3vi7b1, d3vi7c1, d3vi7d1
    automated match to d1iyha1
    complexed with ca, cbd, gsh
  4. Domain d3vi7d2: 3vi7 D:676-799 [217843]
    Other proteins in same PDB: d3vi7a1, d3vi7b1, d3vi7c1, d3vi7d1
    automated match to d1iyha1
    complexed with ca, cbd, gsh
8. Domains for 5ywe:
  1. Domain d5ywea2: 5ywe A:76-199 [360983]
    Other proteins in same PDB: d5ywea1, d5yweb1, d5ywec1, d5ywed1
    automated match to d2cvda1
    complexed with gol, gsh, mg
  2. Domain d5yweb2: 5ywe B:76-199 [360967]
    Other proteins in same PDB: d5ywea1, d5yweb1, d5ywec1, d5ywed1
    automated match to d2cvda1
    complexed with gol, gsh, mg
  3. Domain d5ywec2: 5ywe C:76-199 [360953]
    Other proteins in same PDB: d5ywea1, d5yweb1, d5ywec1, d5ywed1
    automated match to d2cvda1
    complexed with gol, gsh, mg
  4. Domain d5ywed2: 5ywe D:76-199 [360927]
    Other proteins in same PDB: d5ywea1, d5yweb1, d5ywec1, d5ywed1
    automated match to d2cvda1
    complexed with gol, gsh, mg
9. Domains for 5ywx:
  1. Domain d5ywxa2: 5ywx A:76-199 [357214]
    Other proteins in same PDB: d5ywxa1, d5ywxb1, d5ywxc1, d5ywxd1
    automated match to d2cvda1
    complexed with 93c, gol, gsh, mg
  2. Domain d5ywxb2: 5ywx B:76-199 [357183]
    Other proteins in same PDB: d5ywxa1, d5ywxb1, d5ywxc1, d5ywxd1
    automated match to d2cvda1
    complexed with 93c, gol, gsh, mg
  3. Domain d5ywxc2: 5ywx C:76-199 [357138]
    Other proteins in same PDB: d5ywxa1, d5ywxb1, d5ywxc1, d5ywxd1
    automated match to d2cvda1
    complexed with 93c, gol, gsh, mg
  4. Domain d5ywxd2: 5ywx D:76-199 [357205]
    Other proteins in same PDB: d5ywxa1, d5ywxb1, d5ywxc1, d5ywxd1
    automated match to d2cvda1
    complexed with 93c, gol, gsh, mg
10. Domains for 5yx1:
  1. Domain d5yx1a2: 5yx1 A:76-199 [360885]
    Other proteins in same PDB: d5yx1a1, d5yx1b1, d5yx1c1, d5yx1d1
    automated match to d2cvda1
    complexed with gol, gsh, mg, ux4
  2. Domain d5yx1b2: 5yx1 B:76-199 [360955]
    Other proteins in same PDB: d5yx1a1, d5yx1b1, d5yx1c1, d5yx1d1
    automated match to d2cvda1
    complexed with gol, gsh, mg, ux4
  3. Domain d5yx1c2: 5yx1 C:76-199 [360957]
    Other proteins in same PDB: d5yx1a1, d5yx1b1, d5yx1c1, d5yx1d1
    automated match to d2cvda1
    complexed with gol, gsh, mg, ux4
  4. Domain d5yx1d2: 5yx1 D:76-199 [360938]
    Other proteins in same PDB: d5yx1a1, d5yx1b1, d5yx1c1, d5yx1d1
    automated match to d2cvda1
    complexed with gol, gsh, mg, ux4
11. Domain for 6n4e:
  - Domain d6n4ea2: 6n4e A:76-199 [366913]
    Other proteins in same PDB: d6n4ea1
    automated match to d1pd211
    complexed with gsh, kcd
12. Domains for 6w58:
  1. Domain d6w58a2: 6w58 A:76-199 [396115]
    Other proteins in same PDB: d6w58a1, d6w58b1
    automated match to d1pd211
    complexed with gsh, sws
  2. Domain d6w58b2: 6w58 B:76-199 [396132]
    Other proteins in same PDB: d6w58a1, d6w58b1
    automated match to d1pd211
    complexed with gsh, sws
13. Domains for 6w8h:
  1. Domain d6w8ha2: 6w8h A:76-199 [396102]
    Other proteins in same PDB: d6w8ha1, d6w8hc1
    automated match to d1pd211
    complexed with edo, gsh, tjg
  2. Domain d6w8hc2: 6w8h C:76-199 [396104]
    Other proteins in same PDB: d6w8ha1, d6w8hc1
    automated match to d1pd211
    complexed with edo, gsh, tjg
14. Domains for 6ztc:
  1. Domain d6ztca2: 6ztc A:76-199 [417433]
    Other proteins in same PDB: d6ztca1, d6ztcb1, d6ztcb3
    automated match to d5y9za2
    complexed with gol, gsh, mg, qpn
  2. Domain d6ztcb2: 6ztc B:76-199 [417435]
    Other proteins in same PDB: d6ztca1, d6ztcb1, d6ztcb3
    automated match to d5y9za2
    complexed with gol, gsh, mg, qpn
15. Domains for 7jr6:
  1. Domain d7jr6a2: 7jr6 A:76-199 [405326]
    Other proteins in same PDB: d7jr6a1, d7jr6a3, d7jr6b1, d7jr6b3
    automated match to d1pd211
    complexed with gsh, mg, na, vh4
  2. Domain d7jr6b2: 7jr6 B:76-199 [405337]
    Other proteins in same PDB: d7jr6a1, d7jr6a3, d7jr6b1, d7jr6b3
    automated match to d1pd211
    complexed with gsh, mg, na, vh4
16. Domains for 7jr8:
  1. Domain d7jr8a2: 7jr8 A:76-199 [405367]
    Other proteins in same PDB: d7jr8a1, d7jr8a3, d7jr8b1, d7jr8b3
    automated match to d1pd211
    complexed with cl, edo, gsh, mg, na, vh7
  2. Domain d7jr8b2: 7jr8 B:76-199 [405364]
    Other proteins in same PDB: d7jr8a1, d7jr8a3, d7jr8b1, d7jr8b3
    automated match to d1pd211
    complexed with cl, edo, gsh, mg, na, vh7
Norway rat (Rattus norvegicus) [TaxId:10116] [47630] (3 PDB entries)
synonym: hematopoietic prostaglandin D synthase
1. Domains for 1pd2:
  1. Domain d1pd211: 1pd2 1:76-199 [17713]
    Other proteins in same PDB: d1pd212, d1pd222
    complexed with gsh
  2. Domain d1pd221: 1pd2 2:76-199 [17714]
    Other proteins in same PDB: d1pd212, d1pd222
    complexed with gsh
2. Domains for 5y9z:
  1. Domain d5y9za2: 5y9z A:76-199 [357865]
    Other proteins in same PDB: d5y9za1, d5y9zb1
    automated match to d1pd211
    complexed with dio, edo, gol, gsh, mg, pge
  2. Domain d5y9zb2: 5y9z B:76-199 [357831]
    Other proteins in same PDB: d5y9za1, d5y9zb1
    automated match to d1pd211
    complexed with dio, edo, gol, gsh, mg, pge
3. Domains for 6n69:
  1. Domain d6n69a2: 6n69 A:76-199 [366929]
    Other proteins in same PDB: d6n69a1, d6n69b1
    automated match to d1pd211
    complexed with gsh, kdv
  2. Domain d6n69b2: 6n69 B:76-199 [366902]
    Other proteins in same PDB: d6n69a1, d6n69b1
    automated match to d1pd211
    complexed with gsh, kdv
Squid (Ommastrephes sloani pacificus) [TaxId:6634] [47631] (2 PDB entries)
1. Domain for 1gsq:
  - Domain d1gsqa1: 1gsq A:76-202 [17716]
    Other proteins in same PDB: d1gsqa2
    complexed with gdn
2. Domain for 2gsq:
  - Domain d2gsqa1: 2gsq A:76-202 [17715]
    Other proteins in same PDB: d2gsqa2
    complexed with gbi, so4

More info for Protein Class sigma GST from a.45.1.1: Glutathione S-transferase (GST), C-terminal domain

Timeline for Protein Class sigma GST from a.45.1.1: Glutathione S-transferase (GST), C-terminal domain:

Protein Class sigma GST from a.45.1.1: Glutathione S-transferase (GST), C-terminal domain first appeared in SCOP 1.63
Protein Class sigma GST from a.45.1.1: Glutathione S-transferase (GST), C-terminal domain appears in SCOPe 2.07