SCOPe 2.05: Domain d1o8ba1: 1o8b A:23-126,A:199-218

Lineage for d1o8ba1 (1o8b A:23-126,A:199-218)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.124: NagB/RpiA/CoA transferase-like [100949] (1 superfamily)
   core: 3 layers: a/b/a; parallel or mixed beta-sheet of 6 strands, order 321456

4. Superfamily c.124.1: NagB/RpiA/CoA transferase-like [100950] (9 families)

5. Family c.124.1.4: D-ribose-5-phosphate isomerase (RpiA), catalytic domain [75176] (1 protein)
   share a common phosphate-binding site with the NagB-like family; part of sheet is folded upon itself and forms a barrel-like structure like the CoA transferase subunits

6. Protein D-ribose-5-phosphate isomerase (RpiA), catalytic domain [75177] (4 species)

7. Species Escherichia coli [TaxId:562] [75178] (3 PDB entries)

8. Domain d1o8ba1: 1o8b A:23-126,A:199-218 [81180]
   Other proteins in same PDB: d1o8ba2, d1o8bb2
   complexed with abf

Details for d1o8ba1

PDB Entry: 1o8b, 1.25 Å

PDB Description: structure of escherichia coli ribose-5-phosphate isomerase, rpia, complexed with arabinose-5-phosphate.

PDB Compounds: (A:) Ribose 5-phosphate isomerase

SCOPe Domain Sequences for d1o8ba1:

Sequence, based on SEQRES records:

>d1o8ba1 c.124.1.4 (A:23-126,A:199-218) D-ribose-5-phosphate isomerase (RpiA), catalytic domain {Escherichia coli [TaxId: 562]}
ivgvgtgstaahfidalgtmkgqiegavsssdasteklkslgihvfdlnevdslgiyvdg
adeinghmqmikgggaaltrekiiasvaekficiadaskqvdilXanrgadvaligtpdg
vktiv

Sequence, based on observed residues (ATOM records):

>d1o8ba1 c.124.1.4 (A:23-126,A:199-218) D-ribose-5-phosphate isomerase (RpiA), catalytic domain {Escherichia coli [TaxId: 562]}
ivgvgtgstegavsssdafdlnevdslgiyvdgadeinghmqmikgggaltrekiiasva
ekficiadaskqvdilXanrgadvaligtpdgvktiv

Timeline for d1o8ba1:

• d1o8ba1 first appeared in SCOP 1.63
  
• d1o8ba1 appears in SCOPe 2.04
  
• d1o8ba1 appears in SCOPe 2.06
  
• d1o8ba1 appears in the current release, SCOPe 2.08