SCOP 1.71: Domain d1nyla1: 1nyl A:339-546

Lineage for d1nyla1 (1nyl A:339-546)

1. Root: SCOP 1.71

2. Class b: All beta proteins [48724] (149 folds)

3. Fold b.53: Ribosomal protein L25-like [50714] (1 superfamily)
   barrel, closed; n=6, S=10; complex topology

4. Superfamily b.53.1: Ribosomal protein L25-like [50715] (2 families)

5. Family b.53.1.2: Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain [50719] (1 protein)

6. Protein Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain [50720] (1 species)
   duplication, consists of two barrel domains with the swapping of N-terminal strands

7. Species Escherichia coli [TaxId:562] [50721] (13 PDB entries)

8. Domain d1nyla1: 1nyl A:339-546 [80741]
   Other proteins in same PDB: d1nyla2

Details for d1nyla1

PDB Entry: 1nyl, 2.6 Å

PDB Description: Unliganded glutaminyl-tRNA synthetase

SCOP Domain Sequences for d1nyla1:

Sequence, based on SEQRES records:

>d1nyla1 b.53.1.2 (A:339-546) Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain {Escherichia coli}
apramavidpvklvienyqgegemvtmpnhpnkpemgsrqvpfsgeiwidradfreeank
qykrlvlgkevrlrnayvikaervekdaegnittifctydadtlskdpadgrkvkgvihw
vsaahalpveirlydrlfsvpnpgaaddflsvinpeslvikqgfaepslkdavagkafqf
eregyfcldsrhstaekpvfnrtvglrd

Sequence, based on observed residues (ATOM records):

>d1nyla1 b.53.1.2 (A:339-546) Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain {Escherichia coli}
apramavidpvklvienyqgegemvtmpnhpnpemgsrqvpfsgeiwidradfreeankq
ykrlvlgkevrlrnayvikaervekdaegnittifctydadtlvihwvsaahalpveirl
ydrlfsvpnpgaaddflsvinpeslvikqgfaepslkdavagkafqferegyfcldsrht
aekpvfnrtvglrd

Timeline for d1nyla1:

• d1nyla1 first appeared in SCOP 1.63
  
• d1nyla1 appears in SCOP 1.69
  
• d1nyla1 appears in SCOP 1.73
  
• d1nyla1 appears in the current release, SCOPe 2.08