Lineage for d1nkvb1 (1nkv B:3-248)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2129295Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest
  4. 2129296Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (60 families) (S)
  5. 2129850Family c.66.1.21: Hypothetical Protein YjhP [82469] (2 protein domains)
  6. 2129851Protein Hypothetical Protein YjhP [82470] (1 species)
  7. 2129852Species Escherichia coli [TaxId:562] [82471] (1 PDB entry)
  8. 2129854Domain d1nkvb1: 1nkv B:3-248 [80578]
    Other proteins in same PDB: d1nkvb2, d1nkvc2
    structural genomics
    CASP5

Details for d1nkvb1

PDB Entry: 1nkv (more details), 2.9 Å

PDB Description: x-ray structure of yjhp from e.coli northeast structural genomics research consortium (nesg) target er13
PDB Compounds: (B:) HYPOTHETICAL PROTEIN yjhP

SCOPe Domain Sequences for d1nkvb1:

Sequence, based on SEQRES records: (download)

>d1nkvb1 c.66.1.21 (B:3-248) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}
ipriftisesehrihnpfteekyatlgrvlrmkpgtrildlgsgsgemlctwardhgitg
tgidmsslftaqakrraeelgvservhfihndaagyvanekcdvaacvgatwiaggfaga
eellaqslkpggimligepywrqlpateeiaqacgvsstsdfltlpglvgafddlgydvv
emvladqegwdryeaakwltmrrwleanpdddfaaevraelniapkryvtyarecfgwgv
faliar

Sequence, based on observed residues (ATOM records): (download)

>d1nkvb1 c.66.1.21 (B:3-248) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}
ipriftisesehrihnpfteekyatlgrvlrmkpgtrildlgsgsgemlctwardhgitg
tgidmlftaqakrraeelgvservhfiyvanekcdvaacvgagaeellaqslkpggimli
gepywrqlpateeiaqacgvsstsdfltlpglvgafddlgydvvemvladqegwdryeaa
kwltmrrwleanpdddfaaevraelniapkryvtyarecfgwgvfaliar

SCOPe Domain Coordinates for d1nkvb1:

Click to download the PDB-style file with coordinates for d1nkvb1.
(The format of our PDB-style files is described here.)

Timeline for d1nkvb1: