SCOPe 2.05: Domain d1ndbb1: 1ndb B:30-405

Lineage for d1ndbb1 (1ndb B:30-405)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.43: CoA-dependent acyltransferases [52776] (1 superfamily)
   core: 2 layers, a/b; mixed beta-sheet of 6 strands, order 324561; strands 3 & 6 are antiparallel to the rest

4. Superfamily c.43.1: CoA-dependent acyltransferases [52777] (4 families)

5. Family c.43.1.3: Choline/Carnitine O-acyltransferase [82424] (3 proteins)
   Pfam PF00755; monomeric enzyme containing tandem repeat of two CAT subunit-like domains

6. Protein Carnitine acetyltransferase [82425] (2 species)
   relative spatial position of the domains is similar to the monomers in CAT trimer

7. Species Mouse (Mus musculus) [TaxId:10090] [82426] (9 PDB entries)
   Uniprot P47934

8. Domain d1ndbb1: 1ndb B:30-405 [80413]

Details for d1ndbb1

PDB Entry: 1ndb, 1.8 Å

PDB Description: crystal structure of carnitine acetyltransferase

PDB Compounds: (B:) carnitine acetyltransferase

SCOPe Domain Sequences for d1ndbb1:

Sequence; same for both SEQRES and ATOM records:

>d1ndbb1 c.43.1.3 (B:30-405) Carnitine acetyltransferase {Mouse (Mus musculus) [TaxId: 10090]}
ahqdalprlpvpplqqsldyylkalqpivseeewahtkqlvdefqtsggvgerlqkgler
rakkmenwlsewwlktaylqfrqpvviysspgvilpkqdfvdlqgqlrfaakliegvldf
ksmidnetlpveflggqplcmnqyyqilsscrvpgpkqdsvvnflkskrppthitvvhny
qffeldvyhsdgtpltsdqifvqlekiwnsslqsnkepvgiltsnhrntwakaynnlikd
kvnresvnsiqksiftvcldkqvprvsddvyrnhvagqmlhgggskfnsgnrwfdktlqf
ivaedgscgmvyehaaaegppivalvdhvmeytkkpelvrspmvplpmpkklrfnitpei
kndiekakqnlsimiq

Timeline for d1ndbb1:

• d1ndbb1 first appeared in SCOP 1.63
  
• d1ndbb1 appears in SCOPe 2.04
  
• d1ndbb1 appears in SCOPe 2.06
  
• d1ndbb1 appears in the current release, SCOPe 2.08