SCOPe 2.08: Domain d1n54a3: 1n54 A:481-790

Lineage for d1n54a3 (1n54 A:481-790)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.118: alpha-alpha superhelix [48370] (28 superfamilies)
   multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

4. Superfamily a.118.1: ARM repeat [48371] (28 families)

5. Family a.118.1.14: MIF4G domain-like [100908] (6 proteins)
   duplication: family members contains 2 or more structurally similar domains of this fold connected by unstructured linkers
   this is a repeat family; one repeat unit is 1hu3 A:905-942 found in domain

6. Protein CBP80, 80KDa nuclear cap-binding protein [63606] (1 species)
   contains three domains of this fold connected with long linkers

7. Species Human (Homo sapiens) [TaxId:9606] [63607] (6 PDB entries)

8. Domain d1n54a3: 1n54 A:481-790 [80005]
   Other proteins in same PDB: d1n54b_
   protein/RNA complex; complexed with gol
   applies to all domains of a family if the common domain is composed of a different number of small repeating units

Details for d1n54a3

PDB Entry: 1n54, 2.72 Å

PDB Description: Cap Binding Complex m7GpppG free

PDB Compounds: (A:) 80 kda nuclear cap binding protein

SCOPe Domain Sequences for d1n54a3:

Sequence, based on SEQRES records:

>d1n54a3 a.118.1.14 (A:481-790) CBP80, 80KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
ptciykygdessnslpghsvalclavafkskatndeifsilkdvpnpnqdddddegfsfn
plkievfvqtllhlaaksfshsfsalakfhevfktlaesdegklhvlrvmfevwrnhpqm
iavlvdkmirtqivdcaavanwifsselsrdftrlfvweilhstirkmnkhvlkiqkele
eakeklarqhkrrsddddrssdrkdgvleeqierlqekvesaqseqknlflvifqrfimi
ltehlvrcetdgtsvltpwykncierlqqiflqhhqiiqqymvtlenllftaeldphila
vfqqfcalqa

Sequence, based on observed residues (ATOM records):

>d1n54a3 a.118.1.14 (A:481-790) CBP80, 80KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
ptciykygdessnslpghsvalclavafkskatndeifsilkdvpnfnplkievfvqtll
hlaaksfshsfsalakfhevfktlaesdegklhvlrvmfevwrnhpqmiavlvdkmirtq
ivdcaavanwifsselsrdftrlfvweilhstirkmnkhvlkiqkeleeakekleeqier
lqekvesaqseqknlflvifqrfimiltehlvrcetdgtsvltpwykncierlqqiflqh
hqiiqqymvtlenllftaeldphilavfqqfcalqa

Timeline for d1n54a3:

• d1n54a3 first appeared in SCOP 1.63
  
• d1n54a3 appears in SCOPe 2.07