Lineage for d1mm8a1 (1mm8 A:5-476)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2122050Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2123751Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) (S)
    consists of one domain of this fold
  5. 2124325Family c.55.3.4: Transposase inhibitor (Tn5 transposase) [53115] (1 protein)
  6. 2124326Protein Transposase inhibitor (Tn5 transposase) [53116] (1 species)
    contains additional all-alpha subdomains in both N- and C-terminal regions
  7. 2124327Species Escherichia coli [TaxId:562] [53117] (6 PDB entries)
  8. 2124332Domain d1mm8a1: 1mm8 A:5-476 [79301]
    Other proteins in same PDB: d1mm8a2
    complexed with Me DNA
    protein/DNA complex; complexed with mn

Details for d1mm8a1

PDB Entry: 1mm8 (more details), 2.8 Å

PDB Description: Crystal structure of Tn5 Transposase complexed with ME DNA
PDB Compounds: (A:) Tn5 Transposase

SCOPe Domain Sequences for d1mm8a1:

Sequence, based on SEQRES records: (download)

>d1mm8a1 c.55.3.4 (A:5-476) Transposase inhibitor (Tn5 transposase) {Escherichia coli [TaxId: 562]}
alhraadwaksvfssaalgdprrtarlvnvaaqlakysgksitissegskaaqegayrfi
rnpnvsaeairkagamqtvklaqefpellaiedttslsyrhqvaeelgklgsiqdksrgw
wvhsvllleattfrtvgllhqewwmrpddpadadekesgkwlaaaatsrlrmgsmmsnvi
avcdreadihaylqdklahnerfvvrskhprkdvesglylydhlknqpelggyqisipqk
gvvdkrgkrknrparkaslslrsgritlkqgnitlnavlaeeinppkgetplkwllltse
pveslaqalrvidiythrwrieefhkawktgagaerqrmekpdnlermvsilsfvavrll
qlresftppqalraqgllkeaehvesqsaetvltpdecqllgyldkgkrkrkekagslqw
aymaiarlggfmdskrtgiaswgalwegwealqskldgflaakdlmaqgiki

Sequence, based on observed residues (ATOM records): (download)

>d1mm8a1 c.55.3.4 (A:5-476) Transposase inhibitor (Tn5 transposase) {Escherichia coli [TaxId: 562]}
alhraadwaksvfssaalgdprrtarlvnvaaqlakysgksitissegskaaqegayrfi
rnpnvsaeairkagamqtvklaqefpellaiedttslsyrhqvaeelgklgsiqdksrgw
wvhsvllleattfrtvgllhqewwmrpddpadadekesgkwlaaaatsrlrmgsmmsnvi
avcdreadihaylqdklahnerfvvrskhprkdvesglylydhlknqpelggyqisipqk
gvvdkrgkrknrparkaslslrsgritlkqgnitlnavlaeeinppkgetplkwllltse
pveslaqalrvidiythrwrieefhkawktgagaerqrmekpdnlermvsilsfvavrll
qlresftpqsaetvltpdecqllgyldkgkrkrkekagslqwaymaiarlggfmdskrtg
iaswgalwegwealqskldgflaakdlmaqgiki

SCOPe Domain Coordinates for d1mm8a1:

Click to download the PDB-style file with coordinates for d1mm8a1.
(The format of our PDB-style files is described here.)

Timeline for d1mm8a1: