Lineage for d1mczd1 (1mcz D:182-341)

  1. Root: SCOPe 2.06
  2. 2089713Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2121033Fold c.31: DHS-like NAD/FAD-binding domain [52466] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456; Rossmann-like
  4. 2121034Superfamily c.31.1: DHS-like NAD/FAD-binding domain [52467] (7 families) (S)
    binds cofactor molecules in the opposite direction than classical Rossmann fold
  5. 2121061Family c.31.1.3: Pyruvate oxidase and decarboxylase, middle domain [52475] (8 proteins)
    N-terminal domain is Pyr module, and C-terminal domain is PP module of thiamin diphosphate-binding fold
  6. 2121103Protein Benzoylformate decarboxylase [52482] (1 species)
  7. 2121104Species Pseudomonas putida [TaxId:303] [52483] (41 PDB entries)
    Uniprot P20906
  8. 2121172Domain d1mczd1: 1mcz D:182-341 [78961]
    Other proteins in same PDB: d1mcza2, d1mcza3, d1mczb2, d1mczb3, d1mczc2, d1mczc3, d1mczd2, d1mczd3, d1mcze2, d1mcze3, d1mczf2, d1mczf3, d1mczg2, d1mczg3, d1mczh2, d1mczh3, d1mczi2, d1mczi3, d1mczj2, d1mczj3, d1mczk2, d1mczk3, d1mczl2, d1mczl3, d1mczm2, d1mczm3, d1mczn2, d1mczn3, d1mczo2, d1mczo3, d1mczp2, d1mczp3
    complexed with mg, rmn, tdp

Details for d1mczd1

PDB Entry: 1mcz (more details), 2.8 Å

PDB Description: benzoylformate decarboxylase from pseudomonas putida complexed with an inhibitor, r-mandelate
PDB Compounds: (D:) Benzoylformate decarboxylase

SCOPe Domain Sequences for d1mczd1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1mczd1 c.31.1.3 (D:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]}
svrlndqdldilvkalnsasnpaivlgpdvdaananadcvmlaerlkapvwvapsaprcp
fptrhpcfrglmpagiaaisqlleghdvvlvigapvfryhqydpgqylkpgtrlisvtcd
pleaarapmgdaivadigamasalanlveessrqlptaap

SCOPe Domain Coordinates for d1mczd1:

Click to download the PDB-style file with coordinates for d1mczd1.
(The format of our PDB-style files is described here.)

Timeline for d1mczd1:

View in 3D
Domains from other chains:
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d1mcza1, d1mcza2, d1mcza3, d1mczb1, d1mczb2, d1mczb3, d1mczc1, d1mczc2, d1mczc3, d1mcze1, d1mcze2, d1mcze3, d1mczf1, d1mczf2, d1mczf3, d1mczg1, d1mczg2, d1mczg3, d1mczh1, d1mczh2, d1mczh3, d1mczi1, d1mczi2, d1mczi3, d1mczj1, d1mczj2, d1mczj3, d1mczk1, d1mczk2, d1mczk3, d1mczl1, d1mczl2, d1mczl3, d1mczm1, d1mczm2, d1mczm3, d1mczn1, d1mczn2, d1mczn3, d1mczo1, d1mczo2, d1mczo3, d1mczp1, d1mczp2, d1mczp3