Lineage for d1lwsa2 (1lws A:181-298)

  1. Root: SCOP 1.63
  2. 251695Class d: Alpha and beta proteins (a+b) [53931] (224 folds)
  3. 260550Fold d.95: Homing endonuclease-like [55603] (2 superfamilies)
    alpha-beta(2)-alpha-beta(2)-alpha; 2 layers: a/b; antiparallel sheet 1243
  4. 260556Superfamily d.95.2: Homing endonucleases [55608] (2 families) (S)
  5. 260581Family d.95.2.2: Intein endonuclease [55614] (2 proteins)
    duplication: contains tandem repeat of this fold
  6. 260586Protein VMA1-derived endonuclease (VDE) PI-SceI [55615] (1 species)
    homing endonuclease with protein splicing activity
  7. 260587Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [55616] (6 PDB entries)
  8. 260604Domain d1lwsa2: 1lws A:181-298 [78276]
    Other proteins in same PDB: d1lwsa1

Details for d1lwsa2

PDB Entry: 1lws (more details), 3.5 Å

PDB Description: Crystal structure of the intein homing endonuclease PI-SceI bound to its recognition sequence

SCOP Domain Sequences for d1lwsa2:

Sequence, based on SEQRES records: (download)

>d1lwsa2 d.95.2.2 (A:181-298) VMA1-derived endonuclease (VDE) PI-SceI {Baker's yeast (Saccharomyces cerevisiae)}
pilyendhffdymqkskfhltiegpkvlayllglwigdglsdratfsvdsrdtslmervt
eyaeklnlcaeykdrkepqvaktvnlyskvvrgngirnnlntenplwdaivglgflkd

Sequence, based on observed residues (ATOM records): (download)

>d1lwsa2 d.95.2.2 (A:181-298) VMA1-derived endonuclease (VDE) PI-SceI {Baker's yeast (Saccharomyces cerevisiae)}
pilyendhffdymqkskfhltiegpkvlayllglwigdglsdratfsvdsrdtslmervt
eyaeklnlcavaktvnlysenplwdaivglgflkd

SCOP Domain Coordinates for d1lwsa2:

Click to download the PDB-style file with coordinates for d1lwsa2.
(The format of our PDB-style files is described here.)

Timeline for d1lwsa2: