SCOPe 2.08: Domain d1lvm.1: 1lvm A:,E:

Lineage for d1lvm.1 (1lvm A:,E:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
   barrel, closed; n=6, S=8; greek-key
   duplication: consists of two domains of the same fold

4. Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families)

5. Family b.47.1.3: Viral proteases [50596] (5 proteins)
   beta sheet in the first domain is opened rather than forms a barrel

6. Protein TEV protease (nucleat inclusion protein A, NIA) [82126] (1 species)

7. Species Tobacco etch virus, TEV [TaxId:12227] [82127] (3 PDB entries)
   Uniprot P04517 2041-2279

8. Domain d1lvm.1: 1lvm A:,E: [78243]

Details for d1lvm.1

PDB Entry: 1lvm, 1.8 Å

PDB Description: catalytically active tobacco etch virus protease complexed with product

PDB Compounds: (A:) catalytic domain of the nuclear inclusion protein a (nia), (E:) catalytic domain of the nuclear inclusion protein a (nia)

SCOPe Domain Sequences for d1lvm.1:

Sequence; same for both SEQRES and ATOM records:

>g1lvm.1 b.47.1.3 (A:,E:) TEV protease (nucleat inclusion protein A, NIA) {Tobacco etch virus, TEV [TaxId: 12227]}
ghhhhhhhgeslfkgprdynpisstichltnesdghttslygigfgpfiitnkhlfrrnn
gtllvqslhgvfkvkntttlqqhlidgrdmiiirmpkdfppfpqklkfrepqreericlv
ttnfqtksmssmvsdtsctfpssdgifwkhwiqtkdgqcgsplvstrdgfivgihsasnf
tntnnyftsvpknfmelltnqeaqqwvsgwrlnadsvlwgghkvfmdkpXeatqlmn

Timeline for d1lvm.1:

• d1lvm.1 first appeared in SCOP 1.63
  
• d1lvm.1 appears in SCOPe 2.07