SCOPe 2.06: Domain d1luab1: 1lua B:98-288

Lineage for d1luab1 (1lua B:98-288)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain [51883] (12 proteins)
   extra N-terminal helix displaces the C-terminal helix (following strand 6) from its usual position creating a family nicotineamide-binding site

6. Protein Methylene-tetrahydromethanopterin dehydrogenase [82303] (1 species)

7. Species Methylobacterium extorquens [TaxId:408] [82304] (2 PDB entries)

8. Domain d1luab1: 1lua B:98-288 [78218]
   Other proteins in same PDB: d1luaa2, d1luab2, d1luac2
   complexed with nap

Details for d1luab1

PDB Entry: 1lua, 1.9 Å

PDB Description: Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1 complexed with NADP

PDB Compounds: (B:) Methylene Tetrahydromethanopterin Dehydrogenase

SCOPe Domain Sequences for d1luab1:

Sequence; same for both SEQRES and ATOM records:

>d1luab1 c.2.1.7 (B:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}
gsnttaaagvalvvkaaggsvkgkkavvlagtgpvgmrsaallagegaevvlcgrkldka
qaaadsvnkrfkvnvtaaetaddasraeavkgahfvftagaiglellpqaawqnessiei
vadynaqpplgiggidatdkgkeyggkrafgalgigglklklhraciaklfessegvfda
eeiyklakema

Timeline for d1luab1:

• d1luab1 first appeared in SCOP 1.63
  
• d1luab1 appears in SCOPe 2.05
  
• d1luab1 appears in SCOPe 2.07
  
• d1luab1 appears in the current release, SCOPe 2.08