Lineage for d1kolb2 (1kol B:170-339)

  1. Root: SCOP 1.63
  2. 235644Class c: Alpha and beta proteins (a/b) [51349] (117 folds)
  3. 238223Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 238224Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (10 families) (S)
  5. 238225Family c.2.1.1: Alcohol/glucose dehydrogenases, C-terminal domain [51736] (6 proteins)
    N-terminal all-beta domain defines family
  6. 238368Protein Formaldehyde dehydrogenase [82287] (1 species)
  7. 238369Species Pseudomonas putida [TaxId:303] [82288] (1 PDB entry)
  8. 238371Domain d1kolb2: 1kol B:170-339 [77477]
    Other proteins in same PDB: d1kola1, d1kolb1
    complexed with nad, sul, zn

Details for d1kolb2

PDB Entry: 1kol (more details), 1.65 Å

PDB Description: Crystal structure of formaldehyde dehydrogenase

SCOP Domain Sequences for d1kolb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1kolb2 c.2.1.1 (B:170-339) Formaldehyde dehydrogenase {Pseudomonas putida}
ilptgyhgavtagvgpgstvyvagagpvglaaaasarllgaavvivgdlnparlahakaq
gfeiadlsldtplheqiaallgepevdcavdavgfearghghegakheapatvlnslmqv
trvagkigipglyvtedpgavdaaakigslsirfglgwakshsfhtgqtp

SCOP Domain Coordinates for d1kolb2:

Click to download the PDB-style file with coordinates for d1kolb2.
(The format of our PDB-style files is described here.)

Timeline for d1kolb2:

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Domains from same chain:
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d1kolb1