Lineage for d1ka4a_ (1ka4 A:)

  1. Root: SCOPe 2.02
  2. 1190016Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1211973Fold d.92: Zincin-like [55485] (2 superfamilies)
    contains mixed beta sheet with connection over free side of the sheet
  4. 1211974Superfamily d.92.1: Metalloproteases ("zincins"), catalytic domain [55486] (18 families) (S)
  5. 1212133Family d.92.1.5: Neurolysin-like [55505] (5 proteins)
    combines M2, M3 and M32 families of metalloproteases
    the N-terminal half of the structure is multihelical; the C-terminal half contains the thermolysin-like catalytic domain
  6. 1212170Protein Thermostable carboxypeptidase 1 [82731] (1 species)
    M32 (Taq) family member; overall fold is similar to that of neurolysin but is less elaborated
  7. 1212171Species Pyrococcus furiosus [TaxId:2261] [82732] (3 PDB entries)
  8. 1212177Domain d1ka4a_: 1ka4 A: [77306]
    complexed with pb

Details for d1ka4a_

PDB Entry: 1ka4 (more details), 3 Å

PDB Description: Structure of Pyrococcus furiosus carboxypeptidase Nat-Pb
PDB Compounds: (A:) M32 carboxypeptidase

SCOPe Domain Sequences for d1ka4a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ka4a_ d.92.1.5 (A:) Thermostable carboxypeptidase 1 {Pyrococcus furiosus [TaxId: 2261]}
evfqnetikqilakyrriwaighaqsvlgwdlevnmpkegilersvaqgelsvlshelll
hpefvnlvekakglenlneyergivrvldrsiriarafppefirevsettslatkaweea
kakddfskfepwldkiislakraaeylgyeeepydalldlyeeglrtrdvekmfevlekk
lkplldkileegkvprehplekekyerewmervnlwilqkfgfplgtrarldvsahpftt
efgirdvrittryegydfrrtilstvhefghalyelqqderfmftpiaggvslgihesqs
rfweniigrskefveliypvlkenlpfmsnytpedvylyfnivrpdfirteadvvtynfh
illrfklerlmvseeikakdlpemwndemerllgirprkysegilqdihwahgsigyfpt
ytigtllsaqlyyhikkdipdfeekvakaefdpikawlrekihrwgsiyppkellkkaig
edmdaeyfvrwvkekyl

SCOPe Domain Coordinates for d1ka4a_:

Click to download the PDB-style file with coordinates for d1ka4a_.
(The format of our PDB-style files is described here.)

Timeline for d1ka4a_: