Lineage for d1gz0f1 (1gz0 F:78-243)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2150174Fold c.116: alpha/beta knot [75216] (1 superfamily)
    core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot
  4. 2150175Superfamily c.116.1: alpha/beta knot [75217] (9 families) (S)
    known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
    all known members have dimeric structures
  5. 2150176Family c.116.1.1: SpoU-like RNA 2'-O ribose methyltransferase [75218] (5 protein domains)
    contains extra strand (3) in the parallel beta-sheet, order 321546
  6. 2150181Protein RlmB, C-terminal domain [82376] (1 species)
    23S rRNA G2251 2'O-methytransferase
  7. 2150182Species Escherichia coli [TaxId:562] [82377] (1 PDB entry)
  8. 2150188Domain d1gz0f1: 1gz0 F:78-243 [76400]
    Other proteins in same PDB: d1gz0a2, d1gz0b2, d1gz0b3, d1gz0c2, d1gz0d2, d1gz0d3, d1gz0f2, d1gz0f3, d1gz0h2, d1gz0h3

Details for d1gz0f1

PDB Entry: 1gz0 (more details), 2.5 Å

PDB Description: 23s ribosomal rna g2251 2'o-methyltransferase rlmb
PDB Compounds: (F:) hypothetical tRNA/rRNA methyltransferase yjfh

SCOPe Domain Sequences for d1gz0f1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1gz0f1 c.116.1.1 (F:78-243) RlmB, C-terminal domain {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d1gz0f1:

Click to download the PDB-style file with coordinates for d1gz0f1.
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Timeline for d1gz0f1: