SCOPe 2.06: Domain d1gxmb1: 1gxm B:327-649

Lineage for d1gxmb1 (1gxm B:327-649)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.102: alpha/alpha toroid [48207] (6 superfamilies)
   multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies

4. Superfamily a.102.5: Family 10 polysaccharide lyase [81853] (1 family)

5. Family a.102.5.1: Family 10 polysaccharide lyase [81854] (1 protein)
   incomplete toroid made of four hairpins

6. Protein Polygalacturonic acid lyase (pectate lyase) [81855] (2 species)

7. Species Cellvibrio cellulosa [TaxId:155077] [81856] (3 PDB entries)

8. Domain d1gxmb1: 1gxm B:327-649 [76372]
   Other proteins in same PDB: d1gxma2, d1gxmb2
   complexed with gol

Details for d1gxmb1

PDB Entry: 1gxm, 1.32 Å

PDB Description: family 10 polysaccharide lyase from cellvibrio cellulosa

PDB Compounds: (B:) pectate lyase

SCOPe Domain Sequences for d1gxmb1:

Sequence; same for both SEQRES and ATOM records:

>d1gxmb1 a.102.5.1 (B:327-649) Polygalacturonic acid lyase (pectate lyase) {Cellvibrio cellulosa [TaxId: 155077]}
tgrmltldgnpaanwlnnartkwsasradvvlsyqqnnggwpknldynsvgnggggnesg
tidngatitemvflaevyksggntkyrdavrkaanflvnsqystgalpqfyplkggysdh
atfndngmayaltvldfaankrapfdtdvfsdndrtrfktavtkgtdyilkaqwkqngvl
tvwcaqhgaldyqpkkarayeleslsgsesvgvlaflmtqpqtaeieqavragvawfnsp
rtylegytydsslaatnpivpragskmwyrfydlntnrgffsdrdgskfyditqmslerr
tgyswggnygtsiinfaqkvgyl

Timeline for d1gxmb1:

• d1gxmb1 first appeared in SCOP 1.63, called d1gxmb_
  
• d1gxmb1 was called d1gxmb_ in SCOPe 2.05
  
• d1gxmb1 appears in SCOPe 2.07
  
• d1gxmb1 appears in the current release, SCOPe 2.08