Lineage for d1gqjb1 (1gqj B:152-712)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2081496Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2083545Family c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain [82253] (4 protein domains)
    Glycosyl hydrolase family 67, GH67; structurally related to GH20; contains extra C-terminal alpha-helical subdomain
  6. 2083546Protein alpha-D-glucuronidase catalytic domain [82254] (2 species)
    inverting reaction mechanism
  7. 2083555Species Pseudomonas cellulosa [TaxId:155077] [82255] (5 PDB entries)
  8. 2083565Domain d1gqjb1: 1gqj B:152-712 [76285]
    Other proteins in same PDB: d1gqja2, d1gqjb2
    complexed with co, edo

Details for d1gqjb1

PDB Entry: 1gqj (more details), 1.9 Å

PDB Description: structure of pseudomonas cellulosa alpha-d-glucuronidase complexed with xylobiose
PDB Compounds: (B:) alpha-d-glucuronidase

SCOPe Domain Sequences for d1gqjb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1gqjb1 c.1.8.10 (B:152-712) alpha-D-glucuronidase catalytic domain {Pseudomonas cellulosa [TaxId: 155077]}
lqhrvvnhwdnlnrvvergyaglslwdwgslpnylaprytdyarinaslgingtvinnvn
adprvlsdqflqkiaaladafrpygikmylsinfnsprafgdvdtadpldprvqqwwktr
aqkiysyipdfggflvkadsegqpgpqgygrdhaeganmlaaalkpfggvvfwrafvyhp
diedrfrgaydefmpldgkfadnvilqikngpidfqprepfsalfagmsrtnmmmefqit
qeyfgfathlayqgplfeeslktethargegstignilegkvfktrhtgmagvinpgtdr
nwtghpfvqsswyafgrmawdhqisaataadewlrmtfsnqpafiepvkqmmlvsreagv
nyrsplglthlysqgdhygpapwtddlpradwtavyyhrasktgigfnrtktgsnalaqy
pepiakawgdlnsvpedlilwfhhlswdhrmqsgrnlwqelvhkyyqgveqvramqrtwd
qqeayvdaarfaqvkallqvqereavrwrnscvlyfqsvagrpipanyeqpehdleyykm
larttyvpepwhpasssrvlk

SCOPe Domain Coordinates for d1gqjb1:

Click to download the PDB-style file with coordinates for d1gqjb1.
(The format of our PDB-style files is described here.)

Timeline for d1gqjb1:

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Domains from same chain:
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d1gqjb2