SCOPe 2.08: Domain d1gqib1: 1gqi B:152-712

Lineage for d1gqib1 (1gqi B:152-712)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain [82253] (4 proteins)
   Glycosyl hydrolase family 67, GH67; structurally related to GH20; contains extra C-terminal alpha-helical subdomain

6. Protein alpha-D-glucuronidase catalytic domain [82254] (2 species)
   inverting reaction mechanism

7. Species Pseudomonas cellulosa [TaxId:155077] [82255] (5 PDB entries)

8. Domain d1gqib1: 1gqi B:152-712 [76281]
   Other proteins in same PDB: d1gqia2, d1gqib2
   complexed with co, edo, mg
   has additional subdomain(s) that are not in the common domain

Details for d1gqib1

PDB Entry: 1gqi, 1.48 Å

PDB Description: structure of pseudomonas cellulosa alpha-d-glucuronidase

PDB Compounds: (B:) alpha-glucuronidase

SCOPe Domain Sequences for d1gqib1:

Sequence; same for both SEQRES and ATOM records:

>d1gqib1 c.1.8.10 (B:152-712) alpha-D-glucuronidase catalytic domain {Pseudomonas cellulosa [TaxId: 155077]}
lqhrvvnhwdnlnrvvergyaglslwdwgslpnylaprytdyarinaslgingtvinnvn
adprvlsdqflqkiaaladafrpygikmylsinfnsprafgdvdtadpldprvqqwwktr
aqkiysyipdfggflvkadsegqpgpqgygrdhaeganmlaaalkpfggvvfwrafvyhp
diedrfrgaydefmpldgkfadnvilqikngpidfqprepfsalfagmsrtnmmmefqit
qeyfgfathlayqgplfeeslktethargegstignilegkvfktrhtgmagvinpgtdr
nwtghpfvqsswyafgrmawdhqisaataadewlrmtfsnqpafiepvkqmmlvsreagv
nyrsplglthlysqgdhygpapwtddlpradwtavyyhrasktgigfnrtktgsnalaqy
pepiakawgdlnsvpedlilwfhhlswdhrmqsgrnlwqelvhkyyqgveqvramqrtwd
qqeayvdaarfaqvkallqvqereavrwrnscvlyfqsvagrpipanyeqpehdleyykm
larttyvpepwhpasssrvlk

Timeline for d1gqib1:

• d1gqib1 first appeared in SCOP 1.63
  
• d1gqib1 appears in SCOPe 2.07