Lineage for d1gmya_ (1gmy A:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2497139Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2497140Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2497141Family d.3.1.1: Papain-like [54002] (26 protein domains)
  6. 2497142Protein (Pro)cathepsin B [54022] (3 species)
  7. 2497147Species Human (Homo sapiens) [TaxId:9606] [54023] (6 PDB entries)
  8. 2497152Domain d1gmya_: 1gmy A: [76236]
    complexed with aem, apd, dfa

Details for d1gmya_

PDB Entry: 1gmy (more details), 1.9 Å

PDB Description: cathepsin b complexed with dipeptidyl nitrile inhibitor
PDB Compounds: (A:) cathepsin b

SCOPe Domain Sequences for d1gmya_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d1gmya_:

Click to download the PDB-style file with coordinates for d1gmya_.
(The format of our PDB-style files is described here.)

Timeline for d1gmya_: