SCOPe 2.07: Domain d1ffne1: 1ffn E:1-99

Lineage for d1ffne1 (1ffn E:1-99)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)

6. Protein beta2-microglobulin [88600] (7 species)

7. Species Mouse (Mus musculus) [TaxId:10090] [88603] (222 PDB entries)
   Uniprot P01887

8. Domain d1ffne1: 1ffn E:1-99 [76170]
   Other proteins in same PDB: d1ffna1, d1ffna2, d1ffnb2, d1ffnd1, d1ffnd2, d1ffne2

Details for d1ffne1

PDB Entry: 1ffn, 2.7 Å

PDB Description: crystal structure of murine class i h-2db complexed with peptide gp33(c9m)

PDB Compounds: (E:) beta-2 microglobulin, beta chain

SCOPe Domain Sequences for d1ffne1:

Sequence; same for both SEQRES and ATOM records:

>d1ffne1 b.1.1.2 (E:1-99) beta2-microglobulin {Mouse (Mus musculus) [TaxId: 10090]}
iqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskdw
sfyilahteftptetdtyacrvkhdsmaepktvywdrdm

Timeline for d1ffne1:

• d1ffne1 first appeared in SCOP 1.63, called d1ffne_
  
• d1ffne1 appears in SCOPe 2.06
  
• d1ffne1 appears in the current release, SCOPe 2.08