SCOPe 2.01: Domain d1ffnd2: 1ffn D:2-181

Lineage for d1ffnd2 (1ffn D:2-181)

1. Root: SCOPe 2.01

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
   dimeric

4. Superfamily d.19.1: MHC antigen-recognition domain [54452] (1 family)

5. Family d.19.1.1: MHC antigen-recognition domain [54453] (13 proteins)

6. Protein Class I MHC, alpha-1 and alpha-2 domains [54468] (27 species)

7. Species Mouse (Mus musculus), H-2DB [TaxId:10090] [54482] (18 PDB entries)

8. Domain d1ffnd2: 1ffn D:2-181 [76169]
   Other proteins in same PDB: d1ffna1, d1ffnb_, d1ffnd1, d1ffne_

Details for d1ffnd2

PDB Entry: 1ffn, 2.7 Å

PDB Description: crystal structure of murine class i h-2db complexed with peptide gp33(c9m)

PDB Compounds: (D:) H-2 class I histocompatibility antigen, D-B alpha chain

SCOPe Domain Sequences for d1ffnd2:

Sequence; same for both SEQRES and ATOM records:

>d1ffnd2 d.19.1.1 (D:2-181) Class I MHC, alpha-1 and alpha-2 domains {Mouse (Mus musculus), H-2DB [TaxId: 10090]}
phsmryfetavsrpgleepryisvgyvdnkefvrfdsdaenpryeprapwmeqegpeywe
retqkakgqeqwfrvslrnllgyynqsaggshtlqqmsgcdlgsdwrllrgylqfayegr
dyialnedlktwtaadmaaqitrrkweqsgaaehykaylegecvewlhrylkngnatllr

Timeline for d1ffnd2:

• d1ffnd2 first appeared in SCOP 1.63
  
• d1ffnd2 appears in SCOP 1.75
  
• d1ffnd2 appears in SCOPe 2.02
  
• d1ffnd2 appears in the current release, SCOPe 2.08