Lineage for d8icya4 (8icy A:149-335)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2563564Fold d.218: Nucleotidyltransferase [81302] (1 superfamily)
    core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123
  4. 2563565Superfamily d.218.1: Nucleotidyltransferase [81301] (16 families) (S)
  5. 2563573Family d.218.1.2: DNA polymerase beta-like [81300] (5 protein domains)
    insert X in the core is an alpha-beta(2) unit; mixed 5-stranded sheet, order: 12543; contains extra C-terminal alpha+beta subdomain
  6. 2563574Protein DNA polymerase beta, catalytic (31 kD) fragment [81578] (2 species)
  7. 2563575Species Human (Homo sapiens) [TaxId:9606] [81574] (145 PDB entries)
    Uniprot P06746
  8. 2563694Domain d8icya4: 8icy A:149-335 [76083]
    Other proteins in same PDB: d8icya1, d8icya3
    protein/DNA complex; complexed with mn, na, ttp

Details for d8icya4

PDB Entry: 8icy (more details), 3.1 Å

PDB Description: dna polymerase beta (e.c.2.7.7.7)/dna complex + thymidine-5'-triphosphate, soaked in the presence of dttp and mncl2
PDB Compounds: (A:) protein (DNA polymerase beta (e.c.2.7.7.7))

SCOPe Domain Sequences for d8icya4:

Sequence; same for both SEQRES and ATOM records: (download)

>d8icya4 d.218.1.2 (A:149-335) DNA polymerase beta, catalytic (31 kD) fragment {Human (Homo sapiens) [TaxId: 9606]}
ripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqp
kllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycg
vlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyr
epkdrse

SCOPe Domain Coordinates for d8icya4:

Click to download the PDB-style file with coordinates for d8icya4.
(The format of our PDB-style files is described here.)

Timeline for d8icya4: