Lineage for d1bpza3 (1bpz A:92-148)

  1. Root: SCOPe 2.08
  2. Class a: All alpha proteins [46456] (290 folds)
  3. Fold a.60: SAM domain-like [47768] (17 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. Superfamily a.60.12: PsbU/PolX domain-like [81585] (3 families) (S)
    contains one classic and one pseudo HhH motifs
  5. Family a.60.12.1: DNA polymerase beta-like, second domain [81584] (3 proteins)
    topological similarity to the N-terminal domain
    automatically mapped to Pfam PF10391
  6. Protein DNA polymerase beta [81579] (2 species)
  7. Species Human (Homo sapiens) [TaxId:9606] [81575] (145 PDB entries)
  8. Domain d1bpza3: 1bpz A:92-148 [75821]
    Other proteins in same PDB: d1bpza1, d1bpza4
    protein/DNA complex; complexed with na

Details for d1bpza3

PDB Entry: 1bpz (more details), 2.6 Å

PDB Description: human dna polymerase beta complexed with nicked dna
PDB Compounds: (A:) protein (DNA polymerase beta)

SCOPe Domain Sequences for d1bpza3:

Sequence; same for both SEQRES and ATOM records: (download)

>d1bpza3 a.60.12.1 (A:92-148) DNA polymerase beta {Human (Homo sapiens) [TaxId: 9606]}
dtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfek

SCOPe Domain Coordinates for d1bpza3 are not available.

Timeline for d1bpza3:

Domains from same chain:
(mouse over for more information)
d1bpza1, d1bpza4