Lineage for Protein: Noncollagenous (NC1) domain of collagen IV

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2234637Fold d.169: C-type lectin-like [56435] (1 superfamily)
    unusual fold
  4. 2234638Superfamily d.169.1: C-type lectin-like [56436] (9 families) (S)
  5. 2235273Family d.169.1.6: Noncollagenous (NC1) domain of collagen IV [75585] (1 protein)
    duplication: consists of two subdomains of this fold; segment swapping within and between individual domains
    automatically mapped to Pfam PF01413
  6. 2235274Protein Noncollagenous (NC1) domain of collagen IV [75586] (2 species)

Species:

  1. 2235275Cow (Bos taurus) [TaxId:9913] [82820] (3 PDB entries)
    Uniprot P02462 1445-1667
    1. Domains for 1m3d:
      1. 2235336Domain d1m3da1: 1m3d A:5-114 [78533]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      2. 2235337Domain d1m3da2: 1m3d A:115-227 [78534]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      3. 2235338Domain d1m3db1: 1m3d B:6-114 [78535]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      4. 2235339Domain d1m3db2: 1m3d B:115-229 [78536]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      5. 2235340Domain d1m3dc1: 1m3d C:5-114 [78537]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      6. 2235341Domain d1m3dc2: 1m3d C:115-226 [78538]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      7. 2235342Domain d1m3dd1: 1m3d D:4-114 [78539]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      8. 2235343Domain d1m3dd2: 1m3d D:115-228 [78540]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      9. 2235344Domain d1m3de1: 1m3d E:4-114 [78541]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      10. 2235345Domain d1m3de2: 1m3d E:115-227 [78542]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      11. 2235346Domain d1m3df1: 1m3d F:4-114 [78543]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      12. 2235347Domain d1m3df2: 1m3d F:115-226 [78544]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      13. 2235348Domain d1m3dg1: 1m3d G:4-114 [78545]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      14. 2235349Domain d1m3dg2: 1m3d G:115-228 [78546]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      15. 2235350Domain d1m3dh1: 1m3d H:4-114 [78547]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      16. 2235351Domain d1m3dh2: 1m3d H:115-227 [78548]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      17. 2235352Domain d1m3di1: 1m3d I:5-114 [78549]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      18. 2235353Domain d1m3di2: 1m3d I:115-226 [78550]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      19. 2235354Domain d1m3dj1: 1m3d J:5-114 [78551]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      20. 2235355Domain d1m3dj2: 1m3d J:115-227 [78552]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      21. 2235356Domain d1m3dk1: 1m3d K:6-114 [78553]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      22. 2235357Domain d1m3dk2: 1m3d K:115-229 [78554]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      23. 2235358Domain d1m3dl1: 1m3d L:5-114 [78555]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
      24. 2235359Domain d1m3dl2: 1m3d L:115-226 [78556]
        alpha 1 (chains A,B,D,E,G,H,J and K) and alpha 2 (chains C,F,I and L) isoforms
        complexed with br, gol, lu
    2. Domains for 1t60:
      1. 2235288Domain d1t60a1: 1t60 A:6-114 [106497]
        complexed with cl, k, mpd
      2. 2235289Domain d1t60a2: 1t60 A:115-225 [106498]
        complexed with cl, k, mpd
      3. 2235290Domain d1t60b1: 1t60 B:6-114 [106499]
        complexed with cl, k, mpd
      4. 2235291Domain d1t60b2: 1t60 B:115-225 [106500]
        complexed with cl, k, mpd
      5. 2235292Domain d1t60c1: 1t60 C:3-114 [197523]
        automated match to d1m3df1
        complexed with cl, k, mpd
      6. 2235293Domain d1t60c2: 1t60 C:115-225 [197524]
        automated match to d1m3df2
        complexed with cl, k, mpd
      7. 2235294Domain d1t60d1: 1t60 D:6-114 [106501]
        complexed with cl, k, mpd
      8. 2235295Domain d1t60d2: 1t60 D:115-225 [106502]
        complexed with cl, k, mpd
      9. 2235296Domain d1t60e1: 1t60 E:6-114 [106503]
        complexed with cl, k, mpd
      10. 2235297Domain d1t60e2: 1t60 E:115-225 [106504]
        complexed with cl, k, mpd
      11. 2235298Domain d1t60f1: 1t60 F:5-114 [197525]
        automated match to d1m3dc1
        complexed with cl, k, mpd
      12. 2235299Domain d1t60f2: 1t60 F:115-226 [197526]
        automated match to d1m3dc2
        complexed with cl, k, mpd
      13. 2235300Domain d1t60g1: 1t60 G:6-114 [106505]
        complexed with cl, k, mpd
      14. 2235301Domain d1t60g2: 1t60 G:115-225 [106506]
        complexed with cl, k, mpd
      15. 2235302Domain d1t60h1: 1t60 H:6-114 [106507]
        complexed with cl, k, mpd
      16. 2235303Domain d1t60h2: 1t60 H:115-225 [106508]
        complexed with cl, k, mpd
      17. 2235304Domain d1t60i1: 1t60 I:2-114 [197527]
        automated match to d1m3df1
        complexed with cl, k, mpd
      18. 2235305Domain d1t60i2: 1t60 I:115-226 [197528]
        automated match to d1m3df2
        complexed with cl, k, mpd
      19. 2235306Domain d1t60j1: 1t60 J:6-114 [106509]
        complexed with cl, k, mpd
      20. 2235307Domain d1t60j2: 1t60 J:115-225 [106510]
        complexed with cl, k, mpd
      21. 2235308Domain d1t60k1: 1t60 K:6-114 [106511]
        complexed with cl, k, mpd
      22. 2235309Domain d1t60k2: 1t60 K:115-225 [106512]
        complexed with cl, k, mpd
      23. 2235310Domain d1t60l1: 1t60 L:6-114 [197529]
        automated match to d1m3dc1
        complexed with cl, k, mpd
      24. 2235311Domain d1t60l2: 1t60 L:115-226 [197530]
        automated match to d1m3dc2
        complexed with cl, k, mpd
      25. 2235312Domain d1t60m1: 1t60 M:6-114 [106513]
        complexed with cl, k, mpd
      26. 2235313Domain d1t60m2: 1t60 M:115-225 [106514]
        complexed with cl, k, mpd
      27. 2235314Domain d1t60n1: 1t60 N:6-114 [106515]
        complexed with cl, k, mpd
      28. 2235315Domain d1t60n2: 1t60 N:115-225 [106516]
        complexed with cl, k, mpd
      29. 2235316Domain d1t60o1: 1t60 O:3-114 [197531]
        automated match to d1m3df1
        complexed with cl, k, mpd
      30. 2235317Domain d1t60o2: 1t60 O:115-226 [197532]
        automated match to d1m3df2
        complexed with cl, k, mpd
      31. 2235318Domain d1t60p1: 1t60 P:6-114 [106517]
        complexed with cl, k, mpd
      32. 2235319Domain d1t60p2: 1t60 P:115-225 [106518]
        complexed with cl, k, mpd
      33. 2235320Domain d1t60q1: 1t60 Q:6-114 [106519]
        complexed with cl, k, mpd
      34. 2235321Domain d1t60q2: 1t60 Q:115-225 [106520]
        complexed with cl, k, mpd
      35. 2235322Domain d1t60r1: 1t60 R:3-114 [197533]
        automated match to d1m3df1
        complexed with cl, k, mpd
      36. 2235323Domain d1t60r2: 1t60 R:115-226 [197534]
        automated match to d1m3df2
        complexed with cl, k, mpd
      37. 2235324Domain d1t60s1: 1t60 S:6-114 [106521]
        complexed with cl, k, mpd
      38. 2235325Domain d1t60s2: 1t60 S:115-225 [106522]
        complexed with cl, k, mpd
      39. 2235326Domain d1t60t1: 1t60 T:6-114 [106523]
        complexed with cl, k, mpd
      40. 2235327Domain d1t60t2: 1t60 T:115-225 [106524]
        complexed with cl, k, mpd
      41. 2235328Domain d1t60u1: 1t60 U:3-114 [197535]
        automated match to d1m3df1
        complexed with cl, k, mpd
      42. 2235329Domain d1t60u2: 1t60 U:115-226 [197536]
        automated match to d1m3df2
        complexed with cl, k, mpd
      43. 2235330Domain d1t60v1: 1t60 V:6-114 [106525]
        complexed with cl, k, mpd
      44. 2235331Domain d1t60v2: 1t60 V:115-225 [106526]
        complexed with cl, k, mpd
      45. 2235332Domain d1t60w1: 1t60 W:6-114 [106527]
        complexed with cl, k, mpd
      46. 2235333Domain d1t60w2: 1t60 W:115-225 [106528]
        complexed with cl, k, mpd
      47. 2235334Domain d1t60x1: 1t60 X:4-114 [197537]
        automated match to d1m3df1
        complexed with cl, k, mpd
      48. 2235335Domain d1t60x2: 1t60 X:115-226 [197538]
        automated match to d1m3df2
        complexed with cl, k, mpd
    3. Domains for 1t61:
      1. 2235276Domain d1t61a1: 1t61 A:6-114 [106529]
        complexed with ca, cl, gol, k
      2. 2235277Domain d1t61a2: 1t61 A:115-225 [106530]
        complexed with ca, cl, gol, k
      3. 2235278Domain d1t61b1: 1t61 B:6-114 [106531]
        complexed with ca, cl, gol, k
      4. 2235279Domain d1t61b2: 1t61 B:115-225 [106532]
        complexed with ca, cl, gol, k
      5. 2235280Domain d1t61c1: 1t61 C:6-114 [106533]
        complexed with ca, cl, gol, k
      6. 2235281Domain d1t61c2: 1t61 C:115-225 [106534]
        complexed with ca, cl, gol, k
      7. 2235282Domain d1t61d1: 1t61 D:6-114 [106535]
        complexed with ca, cl, gol, k
      8. 2235283Domain d1t61d2: 1t61 D:115-225 [106536]
        complexed with ca, cl, gol, k
      9. 2235284Domain d1t61e1: 1t61 E:6-114 [106537]
        complexed with ca, cl, gol, k
      10. 2235285Domain d1t61e2: 1t61 E:115-225 [106538]
        complexed with ca, cl, gol, k
      11. 2235286Domain d1t61f1: 1t61 F:6-114 [106539]
        complexed with ca, cl, gol, k
      12. 2235287Domain d1t61f2: 1t61 F:115-225 [106540]
        complexed with ca, cl, gol, k
  2. 2235360Human (Homo sapiens) [TaxId:9606] [75587] (1 PDB entry)
    • Domains for 1li1:
      1. 2235361Domain d1li1a1: 1li1 A:2-114 [73898]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      2. 2235362Domain d1li1a2: 1li1 A:115-229 [73899]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      3. 2235363Domain d1li1b1: 1li1 B:3-114 [73900]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      4. 2235364Domain d1li1b2: 1li1 B:115-229 [73901]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      5. 2235365Domain d1li1c1: 1li1 C:5-114 [73902]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      6. 2235366Domain d1li1c2: 1li1 C:115-229 [73903]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      7. 2235367Domain d1li1d1: 1li1 D:2-114 [73904]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      8. 2235368Domain d1li1d2: 1li1 D:115-229 [73905]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      9. 2235369Domain d1li1e1: 1li1 E:3-114 [73906]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      10. 2235370Domain d1li1e2: 1li1 E:115-229 [73907]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      11. 2235371Domain d1li1f1: 1li1 F:4-114 [73908]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act
      12. 2235372Domain d1li1f2: 1li1 F:115-229 [73909]
        alpha 1 (chains A,B,D and E) and alpha 2 (chains C and F) isoforms
        complexed with act

More info for Protein Noncollagenous (NC1) domain of collagen IV from d.169.1.6: Noncollagenous (NC1) domain of collagen IV

Timeline for Protein Noncollagenous (NC1) domain of collagen IV from d.169.1.6: Noncollagenous (NC1) domain of collagen IV: