Lineage for Species: Agrobacterium tumefaciens [TaxId: 358]

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1922390Fold d.110: Profilin-like [55769] (10 superfamilies)
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. 1923000Superfamily d.110.5: Pheromone-binding domain of LuxR-like quorum-sensing transcription factors [75516] (1 family) (S)
    alpha(2)-beta(2)-alpha(2)-beta(3)-alpha; possibly related to the PAS domain
    automatically mapped to Pfam PF03472
  5. 1923001Family d.110.5.1: Pheromone-binding domain of LuxR-like quorum-sensing transcription factors [75517] (1 protein)
  6. 1923002Protein Transcription factor TraR, N-terminal domain [75518] (1 species)
  7. 1923003Species Agrobacterium tumefaciens [TaxId:358] [75519] (2 PDB entries)

PDB entries in Species: Agrobacterium tumefaciens [TaxId: 358]:

  1. Domain(s) for 1h0m:
    1. 1923008Domain d1h0ma2: 1h0m A:1-165 [76443]
      Other proteins in same PDB: d1h0ma1, d1h0mb1, d1h0mc1, d1h0md1
      complexed with hsl, ooa
    2. 1923009Domain d1h0mb2: 1h0m B:1-169 [76445]
      Other proteins in same PDB: d1h0ma1, d1h0mb1, d1h0mc1, d1h0md1
      complexed with hsl, ooa
    3. 1923010Domain d1h0mc2: 1h0m C:1-164 [76447]
      Other proteins in same PDB: d1h0ma1, d1h0mb1, d1h0mc1, d1h0md1
      complexed with hsl, ooa
    4. 1923011Domain d1h0md2: 1h0m D:2-169 [76449]
      Other proteins in same PDB: d1h0ma1, d1h0mb1, d1h0mc1, d1h0md1
      complexed with hsl, ooa
  2. Domain(s) for 1l3l:
    1. 1923004Domain d1l3la2: 1l3l A:2-169 [73542]
      Other proteins in same PDB: d1l3la1, d1l3lb1, d1l3lc1, d1l3ld1
      protein/DNA complex; complexed with lae
    2. 1923005Domain d1l3lb2: 1l3l B:2-169 [73544]
      Other proteins in same PDB: d1l3la1, d1l3lb1, d1l3lc1, d1l3ld1
      protein/DNA complex; complexed with lae
    3. 1923006Domain d1l3lc2: 1l3l C:1-162 [73546]
      Other proteins in same PDB: d1l3la1, d1l3lb1, d1l3lc1, d1l3ld1
      protein/DNA complex; complexed with lae
    4. 1923007Domain d1l3ld2: 1l3l D:1-162 [73548]
      Other proteins in same PDB: d1l3la1, d1l3lb1, d1l3lc1, d1l3ld1
      protein/DNA complex; complexed with lae

More info for Species Agrobacterium tumefaciens [TaxId:358] from d.110.5.1 Transcription factor TraR, N-terminal domain

Timeline for Species Agrobacterium tumefaciens [TaxId:358] from d.110.5.1 Transcription factor TraR, N-terminal domain: