SCOPe 2.06: Family d.89.1.3: Replication protein Rep, nuclease domain

Lineage for Family d.89.1.3: Replication protein Rep, nuclease domain

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.89: Origin of replication-binding domain, RBD-like [55463] (1 superfamily)
   alpha-beta-alpha-beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel sheet 41325

4. Superfamily d.89.1: Origin of replication-binding domain, RBD-like [55464] (6 families)

5. Family d.89.1.3: Replication protein Rep, nuclease domain [75492] (2 proteins)
   automatically mapped to Pfam PF08724

Proteins:

1. Replication protein Rep, nuclease domain [75493] (1 species)

   • Species Adeno-associated virus, aav-5 [TaxId:272636] [75494] (3 PDB entries)

2. automated matches [277252] (2 species)
   not a true protein

   1. Species Adeno-associated virus 2 (isolate srivastava/1982) [TaxId:648242] [277998] (1 PDB entry)

   2. Species Adeno-associated virus 2 [TaxId:10804] [277253] (1 PDB entry)

More info for Family d.89.1.3: Replication protein Rep, nuclease domain

Timeline for Family d.89.1.3: Replication protein Rep, nuclease domain:

• Family d.89.1.3: Replication protein Rep, nuclease domain first appeared in SCOP 1.61
  
• Family d.89.1.3: Replication protein Rep, nuclease domain appears in SCOPe 2.05
  
• Family d.89.1.3: Replication protein Rep, nuclease domain appears in SCOPe 2.07
  
• Family d.89.1.3: Replication protein Rep, nuclease domain appears in the current release, SCOPe 2.08