Lineage for Species: Human (Homo sapiens), tissue isozyme [TaxId: 9606]

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2497139Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2497140Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2497635Family d.3.1.4: Transglutaminase core [54044] (3 protein domains)
  6. 2497641Protein Transglutaminase catalytic domain [54045] (4 species)
  7. 2497679Species Human (Homo sapiens), tissue isozyme [TaxId:9606] [75333] (4 PDB entries)
    GDP-binding protein

PDB entries in Species: Human (Homo sapiens), tissue isozyme [TaxId: 9606]:

  1. Domain(s) for 1kv3:
    1. 2497681Domain d1kv3a4: 1kv3 A:146-468 [73030]
      Other proteins in same PDB: d1kv3a1, d1kv3a2, d1kv3a3, d1kv3b1, d1kv3b2, d1kv3b3, d1kv3c1, d1kv3c2, d1kv3c3, d1kv3d1, d1kv3d2, d1kv3d3, d1kv3e1, d1kv3e2, d1kv3e3, d1kv3f1, d1kv3f2, d1kv3f3
      complexed with gdp
    2. 2497682Domain d1kv3b4: 1kv3 B:146-468 [73034]
      Other proteins in same PDB: d1kv3a1, d1kv3a2, d1kv3a3, d1kv3b1, d1kv3b2, d1kv3b3, d1kv3c1, d1kv3c2, d1kv3c3, d1kv3d1, d1kv3d2, d1kv3d3, d1kv3e1, d1kv3e2, d1kv3e3, d1kv3f1, d1kv3f2, d1kv3f3
      complexed with gdp
    3. 2497683Domain d1kv3c4: 1kv3 C:146-468 [73038]
      Other proteins in same PDB: d1kv3a1, d1kv3a2, d1kv3a3, d1kv3b1, d1kv3b2, d1kv3b3, d1kv3c1, d1kv3c2, d1kv3c3, d1kv3d1, d1kv3d2, d1kv3d3, d1kv3e1, d1kv3e2, d1kv3e3, d1kv3f1, d1kv3f2, d1kv3f3
      complexed with gdp
    4. 2497684Domain d1kv3d4: 1kv3 D:146-468 [73042]
      Other proteins in same PDB: d1kv3a1, d1kv3a2, d1kv3a3, d1kv3b1, d1kv3b2, d1kv3b3, d1kv3c1, d1kv3c2, d1kv3c3, d1kv3d1, d1kv3d2, d1kv3d3, d1kv3e1, d1kv3e2, d1kv3e3, d1kv3f1, d1kv3f2, d1kv3f3
      complexed with gdp
    5. 2497685Domain d1kv3e4: 1kv3 E:146-468 [73046]
      Other proteins in same PDB: d1kv3a1, d1kv3a2, d1kv3a3, d1kv3b1, d1kv3b2, d1kv3b3, d1kv3c1, d1kv3c2, d1kv3c3, d1kv3d1, d1kv3d2, d1kv3d3, d1kv3e1, d1kv3e2, d1kv3e3, d1kv3f1, d1kv3f2, d1kv3f3
      complexed with gdp
    6. 2497686Domain d1kv3f4: 1kv3 F:146-468 [73050]
      Other proteins in same PDB: d1kv3a1, d1kv3a2, d1kv3a3, d1kv3b1, d1kv3b2, d1kv3b3, d1kv3c1, d1kv3c2, d1kv3c3, d1kv3d1, d1kv3d2, d1kv3d3, d1kv3e1, d1kv3e2, d1kv3e3, d1kv3f1, d1kv3f2, d1kv3f3
      complexed with gdp
  2. Domain(s) for 2q3z:
  3. Domain(s) for 3ly6:
    1. 2497687Domain d3ly6a2: 3ly6 A:146-468 [247545]
      Other proteins in same PDB: d3ly6a1, d3ly6a3, d3ly6a4, d3ly6a5, d3ly6b1, d3ly6b3, d3ly6b4, d3ly6b5, d3ly6c1, d3ly6c3, d3ly6c4, d3ly6c5
      automated match to d1kv3a4
      complexed with atp
    2. 2497688Domain d3ly6b2: 3ly6 B:146-468 [247549]
      Other proteins in same PDB: d3ly6a1, d3ly6a3, d3ly6a4, d3ly6a5, d3ly6b1, d3ly6b3, d3ly6b4, d3ly6b5, d3ly6c1, d3ly6c3, d3ly6c4, d3ly6c5
      automated match to d1kv3a4
      complexed with atp
    3. 2497689Domain d3ly6c2: 3ly6 C:146-468 [247553]
      Other proteins in same PDB: d3ly6a1, d3ly6a3, d3ly6a4, d3ly6a5, d3ly6b1, d3ly6b3, d3ly6b4, d3ly6b5, d3ly6c1, d3ly6c3, d3ly6c4, d3ly6c5
      automated match to d1kv3a4
      complexed with atp
  4. Domain(s) for 4pyg:
    1. 2497690Domain d4pyga2: 4pyg A:146-468 [308020]
      Other proteins in same PDB: d4pyga1, d4pyga3, d4pyga4, d4pyga5, d4pygb1, d4pygb3, d4pygb4, d4pygb5, d4pyge1, d4pyge3, d4pyge4, d4pyge5
      automated match to d3ly6a2
      complexed with gtp
    2. 2497691Domain d4pygb2: 4pyg B:146-468 [308025]
      Other proteins in same PDB: d4pyga1, d4pyga3, d4pyga4, d4pyga5, d4pygb1, d4pygb3, d4pygb4, d4pygb5, d4pyge1, d4pyge3, d4pyge4, d4pyge5
      automated match to d3ly6a2
      complexed with gtp
    3. 2497692Domain d4pyge2: 4pyg E:146-468 [308030]
      Other proteins in same PDB: d4pyga1, d4pyga3, d4pyga4, d4pyga5, d4pygb1, d4pygb3, d4pygb4, d4pygb5, d4pyge1, d4pyge3, d4pyge4, d4pyge5
      automated match to d3ly6a2
      complexed with gtp

More info for Species Human (Homo sapiens), tissue isozyme [TaxId:9606] from d.3.1.4 Transglutaminase catalytic domain

Timeline for Species Human (Homo sapiens), tissue isozyme [TaxId:9606] from d.3.1.4 Transglutaminase catalytic domain: