Lineage for Species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
- Root: SCOPe 2.02
Class d: Alpha and beta proteins (a+b) [53931] (376 folds) 
Fold d.3: Cysteine proteinases [54000] (1 superfamily)
consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-AsnSuperfamily d.3.1: Cysteine proteinases [54001] (23 families) 
the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
Family d.3.1.3: Calpain large subunit, catalytic domain (domain II) [54040] (1 protein) Protein Calpain large subunit, catalytic domain (domain II) [54041] (5 species)
includes the N-terminal 'sequence' domain ISpecies Rat (Rattus norvegicus), mu-type [TaxId:10116] [75332] (10 PDB entries)
Uniprot P97571 33-353
PDB entries in Species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]:
- Domain(s) for 1kxr:
Domain d1kxra_: 1kxr A: [73175]
calcium-bound protease core
complexed with ca
Domain d1kxrb_: 1kxr B: [73176]
calcium-bound protease core
complexed with ca
- Domain(s) for 1qxp:
Domain d1qxpa4: 1qxp A:2-355 [96546]
Other proteins in same PDB: d1qxpa1, d1qxpa2, d1qxpa3, d1qxpb1, d1qxpb2, d1qxpb3
mu-like isoform with the large and small subunits fused in a single chain
Domain d1qxpb4: 1qxp B:2-355 [96550]
Other proteins in same PDB: d1qxpa1, d1qxpa2, d1qxpa3, d1qxpb1, d1qxpb2, d1qxpb3
mu-like isoform with the large and small subunits fused in a single chain
- Domain(s) for 1tl9:
Domain d1tl9a_: 1tl9 A: [112505]
complexed with ca
- Domain(s) for 1tlo:
Domain d1tloa_: 1tlo A: [112508]
complexed with ca, e64
- Domain(s) for 2g8e:
Domain d2g8ea1: 2g8e A:33-354 [134769]
automatically matched to d1tloa_
complexed with 0m6, ca, mes
- Domain(s) for 2g8j:
Domain d2g8ja1: 2g8j A:33-354 [134773]
automatically matched to d1tloa_
complexed with ca, d7g
- Domain(s) for 2nqg:
Domain d2nqga1: 2nqg A:33-354 [138453]
automatically matched to d1tloa_
complexed with ca, nqg
- Domain(s) for 2nqi:
Domain d2nqia1: 2nqi A:33-354 [138454]
automatically matched to d1tloa_
complexed with ca, nqi
- Domain(s) for 2r9c:
Domain d2r9ca1: 2r9c A:33-354 [151766]
automatically matched to d1tloa_
complexed with ca, cl, gol, grd
- Domain(s) for 2r9f:
Domain d2r9fa1: 2r9f A:33-354 [151767]
automatically matched to d1tloa_
complexed with ca, cl, gol, k2z
More info for Species Rat (Rattus norvegicus), mu-type [TaxId:10116] from d.3.1.3 Calpain large subunit, catalytic domain (domain II)
Timeline for Species Rat (Rattus norvegicus), mu-type [TaxId:10116] from d.3.1.3 Calpain large subunit, catalytic domain (domain II):
- Species Rat (Rattus norvegicus), mu-type [TaxId:10116] from d.3.1.3 Calpain large subunit, catalytic domain (domain II) first appeared in SCOP 1.61, called Species Rat (Rattus norvegicus), isozyme I [TaxId:10116] from d.3.1.3 Calpain large subunit, catalytic domain (domain II)
- Species Rat (Rattus norvegicus), mu-type [TaxId:10116] from d.3.1.3 Calpain large subunit, catalytic domain (domain II) appears in SCOPe 2.01
- Species Rat (Rattus norvegicus), mu-type [TaxId:10116] from d.3.1.3 Calpain large subunit, catalytic domain (domain II) is called Species Norway rat (Rattus norvegicus), mu-type [TaxId:10116] from d.3.1.3 Calpain large subunit, catalytic domain (domain II) in SCOPe 2.03
- Species Rat (Rattus norvegicus), mu-type [TaxId:10116] from d.3.1.3 Calpain large subunit, catalytic domain (domain II) appears in the current release, SCOPe 2.08, called Species Norway rat (Rattus norvegicus), mu-type [TaxId:10116] from d.3.1.3 Calpain large subunit, catalytic domain (domain II)