Lineage for Species: Norway rat (Rattus norvegicus), mu-type [TaxId: 10116]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2154577Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2154578Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2155026Family d.3.1.3: Calpain large subunit, catalytic domain (domain II) [54040] (1 protein)
    automatically mapped to Pfam PF00648
  6. 2155027Protein Calpain large subunit, catalytic domain (domain II) [54041] (6 species)
    includes the N-terminal 'sequence' domain I
  7. 2155045Species Norway rat (Rattus norvegicus), mu-type [TaxId:10116] [75332] (10 PDB entries)
    Uniprot P97571 33-353

PDB entries in Species: Norway rat (Rattus norvegicus), mu-type [TaxId: 10116]:

  1. Domain(s) for 1kxr:
    1. 2155053Domain d1kxra_: 1kxr A: [73175]
      calcium-bound protease core
      complexed with ca
    2. 2155054Domain d1kxrb_: 1kxr B: [73176]
      calcium-bound protease core
      complexed with ca
  2. Domain(s) for 1qxp:
    1. 2155056Domain d1qxpa4: 1qxp A:2-355 [96546]
      Other proteins in same PDB: d1qxpa1, d1qxpa2, d1qxpa3, d1qxpb1, d1qxpb2, d1qxpb3
      mu-like isoform with the large and small subunits fused in a single chain
    2. 2155057Domain d1qxpb4: 1qxp B:2-355 [96550]
      Other proteins in same PDB: d1qxpa1, d1qxpa2, d1qxpa3, d1qxpb1, d1qxpb2, d1qxpb3
      mu-like isoform with the large and small subunits fused in a single chain
  3. Domain(s) for 1tl9:
  4. Domain(s) for 1tlo:
  5. Domain(s) for 2g8e:
  6. Domain(s) for 2g8j:
  7. Domain(s) for 2nqg:
  8. Domain(s) for 2nqi:
  9. Domain(s) for 2r9c:
  10. Domain(s) for 2r9f:

More info for Species Norway rat (Rattus norvegicus), mu-type [TaxId:10116] from d.3.1.3 Calpain large subunit, catalytic domain (domain II)

Timeline for Species Norway rat (Rattus norvegicus), mu-type [TaxId:10116] from d.3.1.3 Calpain large subunit, catalytic domain (domain II):